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Heart murmur detection from phonocardiogram recordings: The George B. Moody PhysioNet Challenge 2022

Cardiac auscultation is an accessible diagnostic screening tool that can help to identify patients with heart murmurs, who may need follow-up diagnostic screening and treatment for abnormal cardiac function. However, experts are needed to interpret the heart sounds, limiting the accessibility of car...

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Autores principales: Reyna, Matthew A., Kiarashi, Yashar, Elola, Andoni, Oliveira, Jorge, Renna, Francesco, Gu, Annie, Perez Alday, Erick A., Sadr, Nadi, Sharma, Ashish, Kpodonu, Jacques, Mattos, Sandra, Coimbra, Miguel T., Sameni, Reza, Rad, Ali Bahrami, Clifford, Gari D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10495026/
https://www.ncbi.nlm.nih.gov/pubmed/37695769
http://dx.doi.org/10.1371/journal.pdig.0000324
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author Reyna, Matthew A.
Kiarashi, Yashar
Elola, Andoni
Oliveira, Jorge
Renna, Francesco
Gu, Annie
Perez Alday, Erick A.
Sadr, Nadi
Sharma, Ashish
Kpodonu, Jacques
Mattos, Sandra
Coimbra, Miguel T.
Sameni, Reza
Rad, Ali Bahrami
Clifford, Gari D.
author_facet Reyna, Matthew A.
Kiarashi, Yashar
Elola, Andoni
Oliveira, Jorge
Renna, Francesco
Gu, Annie
Perez Alday, Erick A.
Sadr, Nadi
Sharma, Ashish
Kpodonu, Jacques
Mattos, Sandra
Coimbra, Miguel T.
Sameni, Reza
Rad, Ali Bahrami
Clifford, Gari D.
author_sort Reyna, Matthew A.
collection PubMed
description Cardiac auscultation is an accessible diagnostic screening tool that can help to identify patients with heart murmurs, who may need follow-up diagnostic screening and treatment for abnormal cardiac function. However, experts are needed to interpret the heart sounds, limiting the accessibility of cardiac auscultation in resource-constrained environments. Therefore, the George B. Moody PhysioNet Challenge 2022 invited teams to develop algorithmic approaches for detecting heart murmurs and abnormal cardiac function from phonocardiogram (PCG) recordings of heart sounds. For the Challenge, we sourced 5272 PCG recordings from 1452 primarily pediatric patients in rural Brazil, and we invited teams to implement diagnostic screening algorithms for detecting heart murmurs and abnormal cardiac function from the recordings. We required the participants to submit the complete training and inference code for their algorithms, improving the transparency, reproducibility, and utility of their work. We also devised an evaluation metric that considered the costs of screening, diagnosis, misdiagnosis, and treatment, allowing us to investigate the benefits of algorithmic diagnostic screening and facilitate the development of more clinically relevant algorithms. We received 779 algorithms from 87 teams during the Challenge, resulting in 53 working codebases for detecting heart murmurs and abnormal cardiac function from PCG recordings. These algorithms represent a diversity of approaches from both academia and industry, including methods that use more traditional machine learning techniques with engineered clinical and statistical features as well as methods that rely primarily on deep learning models to discover informative features. The use of heart sound recordings for identifying heart murmurs and abnormal cardiac function allowed us to explore the potential of algorithmic approaches for providing more accessible diagnostic screening in resource-constrained environments. The submission of working, open-source algorithms and the use of novel evaluation metrics supported the reproducibility, generalizability, and clinical relevance of the research from the Challenge.
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spelling pubmed-104950262023-09-12 Heart murmur detection from phonocardiogram recordings: The George B. Moody PhysioNet Challenge 2022 Reyna, Matthew A. Kiarashi, Yashar Elola, Andoni Oliveira, Jorge Renna, Francesco Gu, Annie Perez Alday, Erick A. Sadr, Nadi Sharma, Ashish Kpodonu, Jacques Mattos, Sandra Coimbra, Miguel T. Sameni, Reza Rad, Ali Bahrami Clifford, Gari D. PLOS Digit Health Review Cardiac auscultation is an accessible diagnostic screening tool that can help to identify patients with heart murmurs, who may need follow-up diagnostic screening and treatment for abnormal cardiac function. However, experts are needed to interpret the heart sounds, limiting the accessibility of cardiac auscultation in resource-constrained environments. Therefore, the George B. Moody PhysioNet Challenge 2022 invited teams to develop algorithmic approaches for detecting heart murmurs and abnormal cardiac function from phonocardiogram (PCG) recordings of heart sounds. For the Challenge, we sourced 5272 PCG recordings from 1452 primarily pediatric patients in rural Brazil, and we invited teams to implement diagnostic screening algorithms for detecting heart murmurs and abnormal cardiac function from the recordings. We required the participants to submit the complete training and inference code for their algorithms, improving the transparency, reproducibility, and utility of their work. We also devised an evaluation metric that considered the costs of screening, diagnosis, misdiagnosis, and treatment, allowing us to investigate the benefits of algorithmic diagnostic screening and facilitate the development of more clinically relevant algorithms. We received 779 algorithms from 87 teams during the Challenge, resulting in 53 working codebases for detecting heart murmurs and abnormal cardiac function from PCG recordings. These algorithms represent a diversity of approaches from both academia and industry, including methods that use more traditional machine learning techniques with engineered clinical and statistical features as well as methods that rely primarily on deep learning models to discover informative features. The use of heart sound recordings for identifying heart murmurs and abnormal cardiac function allowed us to explore the potential of algorithmic approaches for providing more accessible diagnostic screening in resource-constrained environments. The submission of working, open-source algorithms and the use of novel evaluation metrics supported the reproducibility, generalizability, and clinical relevance of the research from the Challenge. Public Library of Science 2023-09-11 /pmc/articles/PMC10495026/ /pubmed/37695769 http://dx.doi.org/10.1371/journal.pdig.0000324 Text en © 2023 Reyna et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Review
Reyna, Matthew A.
Kiarashi, Yashar
Elola, Andoni
Oliveira, Jorge
Renna, Francesco
Gu, Annie
Perez Alday, Erick A.
Sadr, Nadi
Sharma, Ashish
Kpodonu, Jacques
Mattos, Sandra
Coimbra, Miguel T.
Sameni, Reza
Rad, Ali Bahrami
Clifford, Gari D.
Heart murmur detection from phonocardiogram recordings: The George B. Moody PhysioNet Challenge 2022
title Heart murmur detection from phonocardiogram recordings: The George B. Moody PhysioNet Challenge 2022
title_full Heart murmur detection from phonocardiogram recordings: The George B. Moody PhysioNet Challenge 2022
title_fullStr Heart murmur detection from phonocardiogram recordings: The George B. Moody PhysioNet Challenge 2022
title_full_unstemmed Heart murmur detection from phonocardiogram recordings: The George B. Moody PhysioNet Challenge 2022
title_short Heart murmur detection from phonocardiogram recordings: The George B. Moody PhysioNet Challenge 2022
title_sort heart murmur detection from phonocardiogram recordings: the george b. moody physionet challenge 2022
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10495026/
https://www.ncbi.nlm.nih.gov/pubmed/37695769
http://dx.doi.org/10.1371/journal.pdig.0000324
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