Cargando…
Calculating RNA degradation rates using large-scale normalization in mouse embryonic stem cells
Data normalization is critical to the process of estimating RNA degradation by analyzing RNA levels when transcription is blocked. Here, we present a protocol for measuring mRNA degradation rates, optimized for mouse embryonic stem cells, using α-amanitin inhibitor. We describe steps for a time cour...
Autores principales: | Viegas, Juliane Oliveira, Fishman, Lior, Meshorer, Eran, Rabani, Michal |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10495639/ https://www.ncbi.nlm.nih.gov/pubmed/37656628 http://dx.doi.org/10.1016/j.xpro.2023.102534 |
Ejemplares similares
-
RNA degradation eliminates developmental transcripts during murine embryonic stem cell differentiation via CAPRIN1-XRN2
por: Viegas, Juliane O., et al.
Publicado: (2022) -
Systematic identification of gene family regulators in mouse and human embryonic stem cells
por: Aaronson, Yair, et al.
Publicado: (2016) -
Fluorescent protein lifetimes report densities and phases of nuclear condensates during embryonic stem-cell differentiation
por: Joron, Khalil, et al.
Publicado: (2023) -
Single-cell temporal dynamics reveals the relative contributions of transcription and degradation to cell-type specific gene expression in zebrafish embryos
por: Fishman, Lior, et al.
Publicado: (2023) -
Asynchronous transcriptional silencing of individual retroviral genomes in embryonic cells
por: Schlesinger, Sharon, et al.
Publicado: (2014)