Cargando…

Comprehensive characterization of pyroptosis phenotypes with distinct tumor immune profiles in gastric cancer to aid immunotherapy

Objective: Pyroptosis is a form of programmed cell death that is essential for immunity. Herein, this study was conducted to uncover the implication of pyroptosis in immunomodulation and tumor microenvironment (TME) in gastric cancer. Methods: Prognostic pyroptosis-related genes were extracted to id...

Descripción completa

Detalles Bibliográficos
Autores principales: Huang, Kaida, Lin, Yubiao, Qiu, Guoqin, Wang, Shengyu, Feng, Lihua, Zheng, Zhigao, Gao, Yingqin, Fan, Xin, Zheng, Wenhui, Zhuang, Jianmin, Luo, Fanghong, Feng, Shuitu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10497016/
https://www.ncbi.nlm.nih.gov/pubmed/37595258
http://dx.doi.org/10.18632/aging.204958
_version_ 1785105216801079296
author Huang, Kaida
Lin, Yubiao
Qiu, Guoqin
Wang, Shengyu
Feng, Lihua
Zheng, Zhigao
Gao, Yingqin
Fan, Xin
Zheng, Wenhui
Zhuang, Jianmin
Luo, Fanghong
Feng, Shuitu
author_facet Huang, Kaida
Lin, Yubiao
Qiu, Guoqin
Wang, Shengyu
Feng, Lihua
Zheng, Zhigao
Gao, Yingqin
Fan, Xin
Zheng, Wenhui
Zhuang, Jianmin
Luo, Fanghong
Feng, Shuitu
author_sort Huang, Kaida
collection PubMed
description Objective: Pyroptosis is a form of programmed cell death that is essential for immunity. Herein, this study was conducted to uncover the implication of pyroptosis in immunomodulation and tumor microenvironment (TME) in gastric cancer. Methods: Prognostic pyroptosis-related genes were extracted to identify different pyroptosis phenotypes and pyroptosis genomic phenotypes via unsupervised clustering analysis in the gastric cancer meta-cohort cohort (GSE15459, GSE62254, GSE84437, GSE26253 and TCGA-STAD). The activation of hallmark gene sets was quantified by GSVA and immune cell infiltration was estimated via ssGSEA and CIBERSORT. Through PCA algorithm, pyroptosis score was conducted. The predictors of immune response (TMB and IPS) and genetic mutations were evaluated. The efficacy of pyroptosis score in predicting immune response was verified in two anti-PD-1 therapy cohorts. Results: Three different pyroptosis phenotypes with different prognosis, biological pathways and tumor immune microenvironment were established among 1275 gastric cancer patients, corresponding to three immune phenotypes: immune-inflamed, immune-desert, and immune-excluded. According to the pyroptosis score, patients were separated into high and low pyroptosis score groups. Low pyroptosis score indicated favorable survival outcomes, enhanced immune responses, and increased mutation frequency. Moreover, low pyroptosis score patients displayed more clinical benefits from anti-PD-1 and prolonged survival time. Conclusion: Our findings uncovered a nonnegligible role of pyroptosis in immunomodulation and TME multiformity and complicacy in gastric cancer. Quantifying the pyroptosis score in individual tumors may tailor more effective immunotherapeutic strategies.
format Online
Article
Text
id pubmed-10497016
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Impact Journals
record_format MEDLINE/PubMed
spelling pubmed-104970162023-09-13 Comprehensive characterization of pyroptosis phenotypes with distinct tumor immune profiles in gastric cancer to aid immunotherapy Huang, Kaida Lin, Yubiao Qiu, Guoqin Wang, Shengyu Feng, Lihua Zheng, Zhigao Gao, Yingqin Fan, Xin Zheng, Wenhui Zhuang, Jianmin Luo, Fanghong Feng, Shuitu Aging (Albany NY) Research Paper Objective: Pyroptosis is a form of programmed cell death that is essential for immunity. Herein, this study was conducted to uncover the implication of pyroptosis in immunomodulation and tumor microenvironment (TME) in gastric cancer. Methods: Prognostic pyroptosis-related genes were extracted to identify different pyroptosis phenotypes and pyroptosis genomic phenotypes via unsupervised clustering analysis in the gastric cancer meta-cohort cohort (GSE15459, GSE62254, GSE84437, GSE26253 and TCGA-STAD). The activation of hallmark gene sets was quantified by GSVA and immune cell infiltration was estimated via ssGSEA and CIBERSORT. Through PCA algorithm, pyroptosis score was conducted. The predictors of immune response (TMB and IPS) and genetic mutations were evaluated. The efficacy of pyroptosis score in predicting immune response was verified in two anti-PD-1 therapy cohorts. Results: Three different pyroptosis phenotypes with different prognosis, biological pathways and tumor immune microenvironment were established among 1275 gastric cancer patients, corresponding to three immune phenotypes: immune-inflamed, immune-desert, and immune-excluded. According to the pyroptosis score, patients were separated into high and low pyroptosis score groups. Low pyroptosis score indicated favorable survival outcomes, enhanced immune responses, and increased mutation frequency. Moreover, low pyroptosis score patients displayed more clinical benefits from anti-PD-1 and prolonged survival time. Conclusion: Our findings uncovered a nonnegligible role of pyroptosis in immunomodulation and TME multiformity and complicacy in gastric cancer. Quantifying the pyroptosis score in individual tumors may tailor more effective immunotherapeutic strategies. Impact Journals 2023-08-17 /pmc/articles/PMC10497016/ /pubmed/37595258 http://dx.doi.org/10.18632/aging.204958 Text en Copyright: © 2023 Huang et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Huang, Kaida
Lin, Yubiao
Qiu, Guoqin
Wang, Shengyu
Feng, Lihua
Zheng, Zhigao
Gao, Yingqin
Fan, Xin
Zheng, Wenhui
Zhuang, Jianmin
Luo, Fanghong
Feng, Shuitu
Comprehensive characterization of pyroptosis phenotypes with distinct tumor immune profiles in gastric cancer to aid immunotherapy
title Comprehensive characterization of pyroptosis phenotypes with distinct tumor immune profiles in gastric cancer to aid immunotherapy
title_full Comprehensive characterization of pyroptosis phenotypes with distinct tumor immune profiles in gastric cancer to aid immunotherapy
title_fullStr Comprehensive characterization of pyroptosis phenotypes with distinct tumor immune profiles in gastric cancer to aid immunotherapy
title_full_unstemmed Comprehensive characterization of pyroptosis phenotypes with distinct tumor immune profiles in gastric cancer to aid immunotherapy
title_short Comprehensive characterization of pyroptosis phenotypes with distinct tumor immune profiles in gastric cancer to aid immunotherapy
title_sort comprehensive characterization of pyroptosis phenotypes with distinct tumor immune profiles in gastric cancer to aid immunotherapy
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10497016/
https://www.ncbi.nlm.nih.gov/pubmed/37595258
http://dx.doi.org/10.18632/aging.204958
work_keys_str_mv AT huangkaida comprehensivecharacterizationofpyroptosisphenotypeswithdistincttumorimmuneprofilesingastriccancertoaidimmunotherapy
AT linyubiao comprehensivecharacterizationofpyroptosisphenotypeswithdistincttumorimmuneprofilesingastriccancertoaidimmunotherapy
AT qiuguoqin comprehensivecharacterizationofpyroptosisphenotypeswithdistincttumorimmuneprofilesingastriccancertoaidimmunotherapy
AT wangshengyu comprehensivecharacterizationofpyroptosisphenotypeswithdistincttumorimmuneprofilesingastriccancertoaidimmunotherapy
AT fenglihua comprehensivecharacterizationofpyroptosisphenotypeswithdistincttumorimmuneprofilesingastriccancertoaidimmunotherapy
AT zhengzhigao comprehensivecharacterizationofpyroptosisphenotypeswithdistincttumorimmuneprofilesingastriccancertoaidimmunotherapy
AT gaoyingqin comprehensivecharacterizationofpyroptosisphenotypeswithdistincttumorimmuneprofilesingastriccancertoaidimmunotherapy
AT fanxin comprehensivecharacterizationofpyroptosisphenotypeswithdistincttumorimmuneprofilesingastriccancertoaidimmunotherapy
AT zhengwenhui comprehensivecharacterizationofpyroptosisphenotypeswithdistincttumorimmuneprofilesingastriccancertoaidimmunotherapy
AT zhuangjianmin comprehensivecharacterizationofpyroptosisphenotypeswithdistincttumorimmuneprofilesingastriccancertoaidimmunotherapy
AT luofanghong comprehensivecharacterizationofpyroptosisphenotypeswithdistincttumorimmuneprofilesingastriccancertoaidimmunotherapy
AT fengshuitu comprehensivecharacterizationofpyroptosisphenotypeswithdistincttumorimmuneprofilesingastriccancertoaidimmunotherapy