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Prognostic significance and mechanisms of CXCL genes in clear cell renal cell carcinoma
This study aimed to investigate the clinical significance, biological functions, and underlying mechanisms of CXCL genes in clear cell renal cell carcinoma (ccRcc) based on patient datasets and pan-cancer analysis. The interaction between CXCL genes in ccRcc and immune components, particularly in re...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10497021/ https://www.ncbi.nlm.nih.gov/pubmed/37540227 http://dx.doi.org/10.18632/aging.204922 |
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author | Shen, Junwen Wang, Rongjiang Chen, Yu Fang, Zhihai Tang, Jianer Yao, Jianxiang Gao, Jianguo Chen, Xiaonong Shi, Xinli |
author_facet | Shen, Junwen Wang, Rongjiang Chen, Yu Fang, Zhihai Tang, Jianer Yao, Jianxiang Gao, Jianguo Chen, Xiaonong Shi, Xinli |
author_sort | Shen, Junwen |
collection | PubMed |
description | This study aimed to investigate the clinical significance, biological functions, and underlying mechanisms of CXCL genes in clear cell renal cell carcinoma (ccRcc) based on patient datasets and pan-cancer analysis. The interaction between CXCL genes in ccRcc and immune components, particularly in relation to neutrophil recruitment and polarization mechanisms, was also evaluated. Furthermore, a risk score was developed using a signature for neutrophil polarization. The role of CXCL2 was assessed through in vitro experiments. Results showed that five CXCL genes (CXCL 2, 5, 9, 10, and 11) were upregulated in renal cancer tissue, while seven genes (CXCL 1, 2, 3, 5, 8, 13, and 14) significantly impacted patient survival. Moreover, CXCL 1, 5, and 13 affected progression-free survival. Besides, differences in mRNA expression and immune components affected renal cancer outcomes. Furthermore, three pairs of CXCL gene-immune cell interactions (CXCL13-CD8+ T cells, CXCL9/10-M1 cells, CXCL1/2/3/8-neutrophils) were identified through single-cell and pan-cancer analysis. A TAN risk score with prognostic value for KIRC patients was constructed using 11 genes and a TAN signature. Neutrophil polarization significantly impacted survival. Notably, CXCL2 was involved in neutrophil recruitment and polarization, thus promoting ccRcc progression. In conclusion, seven prognostic CXCL genes (CXCL 1/2/3/5/8/13/14) for ccRcc patients and three pairs of CXCL gene-immune cell interactions were identified. Furthermore, results showed that CXCL 2 promotes ccRcc progression through neutrophil recruitment and polarization. |
format | Online Article Text |
id | pubmed-10497021 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-104970212023-09-13 Prognostic significance and mechanisms of CXCL genes in clear cell renal cell carcinoma Shen, Junwen Wang, Rongjiang Chen, Yu Fang, Zhihai Tang, Jianer Yao, Jianxiang Gao, Jianguo Chen, Xiaonong Shi, Xinli Aging (Albany NY) Research Paper This study aimed to investigate the clinical significance, biological functions, and underlying mechanisms of CXCL genes in clear cell renal cell carcinoma (ccRcc) based on patient datasets and pan-cancer analysis. The interaction between CXCL genes in ccRcc and immune components, particularly in relation to neutrophil recruitment and polarization mechanisms, was also evaluated. Furthermore, a risk score was developed using a signature for neutrophil polarization. The role of CXCL2 was assessed through in vitro experiments. Results showed that five CXCL genes (CXCL 2, 5, 9, 10, and 11) were upregulated in renal cancer tissue, while seven genes (CXCL 1, 2, 3, 5, 8, 13, and 14) significantly impacted patient survival. Moreover, CXCL 1, 5, and 13 affected progression-free survival. Besides, differences in mRNA expression and immune components affected renal cancer outcomes. Furthermore, three pairs of CXCL gene-immune cell interactions (CXCL13-CD8+ T cells, CXCL9/10-M1 cells, CXCL1/2/3/8-neutrophils) were identified through single-cell and pan-cancer analysis. A TAN risk score with prognostic value for KIRC patients was constructed using 11 genes and a TAN signature. Neutrophil polarization significantly impacted survival. Notably, CXCL2 was involved in neutrophil recruitment and polarization, thus promoting ccRcc progression. In conclusion, seven prognostic CXCL genes (CXCL 1/2/3/5/8/13/14) for ccRcc patients and three pairs of CXCL gene-immune cell interactions were identified. Furthermore, results showed that CXCL 2 promotes ccRcc progression through neutrophil recruitment and polarization. Impact Journals 2023-08-03 /pmc/articles/PMC10497021/ /pubmed/37540227 http://dx.doi.org/10.18632/aging.204922 Text en Copyright: © 2023 Shen et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Shen, Junwen Wang, Rongjiang Chen, Yu Fang, Zhihai Tang, Jianer Yao, Jianxiang Gao, Jianguo Chen, Xiaonong Shi, Xinli Prognostic significance and mechanisms of CXCL genes in clear cell renal cell carcinoma |
title | Prognostic significance and mechanisms of CXCL genes in clear cell renal cell carcinoma |
title_full | Prognostic significance and mechanisms of CXCL genes in clear cell renal cell carcinoma |
title_fullStr | Prognostic significance and mechanisms of CXCL genes in clear cell renal cell carcinoma |
title_full_unstemmed | Prognostic significance and mechanisms of CXCL genes in clear cell renal cell carcinoma |
title_short | Prognostic significance and mechanisms of CXCL genes in clear cell renal cell carcinoma |
title_sort | prognostic significance and mechanisms of cxcl genes in clear cell renal cell carcinoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10497021/ https://www.ncbi.nlm.nih.gov/pubmed/37540227 http://dx.doi.org/10.18632/aging.204922 |
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