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Identifying possible biomarkers of lower urinary tract symptoms using metabolomics and partial least square regression
INTRODUCTION: The objective of this study was to explore potential novel biomarkers for moderate to severe lower urinary tract symptoms (LUTS) using a metabolomics-based approach, and statistical methods with significant different features than previous reported. MATERIALS AND METHODS: The patients...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10497431/ https://www.ncbi.nlm.nih.gov/pubmed/37698748 http://dx.doi.org/10.1007/s11306-023-02046-2 |
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author | Hopland-Nechita, Florin V Andersen, John R Rajalahti, Tarja Kvalheim Andreassen, Trygve Beisland, Christian |
author_facet | Hopland-Nechita, Florin V Andersen, John R Rajalahti, Tarja Kvalheim Andreassen, Trygve Beisland, Christian |
author_sort | Hopland-Nechita, Florin V |
collection | PubMed |
description | INTRODUCTION: The objective of this study was to explore potential novel biomarkers for moderate to severe lower urinary tract symptoms (LUTS) using a metabolomics-based approach, and statistical methods with significant different features than previous reported. MATERIALS AND METHODS: The patients and the controls were selected to participate in the study according to inclusion/exclusion criteria (n = 82). We recorded the following variables: International prostatic symptom score (IPSS), prostate volume, comorbidities, PSA, height, weight, triglycerides, glycemia, HDL cholesterol, and blood pressure. The study of 41 plasma metabolites was done using the nuclear magnetic resonance spectroscopy technique. First, the correlations between the metabolites and the IPSS were done using Pearson. Second, significant biomarkers of LUTS from metabolites were further analysed using a multiple linear regression model. Finally, we validated the findings using partial least square regression (PLS). RESULTS: Small to moderate correlations were found between IPSS and methionine (-0.301), threonine (-0.320), lactic acid (0.294), pyruvic acid (0.207) and 2-aminobutyric-acid (0.229). The multiple linear regression model revealed that only threonine (p = 0.022) was significantly associated with IPSS, whereas methionine (p = 0.103), lactic acid (p = 0.093), pyruvic acid (p = 0.847) and 2-aminobutyric-acid (p = 0.244) lost their significance. However, all metabolites lost their significance in the PLS model. CONCLUSION: When using the robust PLS-regression method, none of the metabolites in our analysis had a significant association with lower urinary tract symptoms. This highlights the importance of using appropriate statistical methods when exploring new biomarkers in urology. |
format | Online Article Text |
id | pubmed-10497431 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-104974312023-09-14 Identifying possible biomarkers of lower urinary tract symptoms using metabolomics and partial least square regression Hopland-Nechita, Florin V Andersen, John R Rajalahti, Tarja Kvalheim Andreassen, Trygve Beisland, Christian Metabolomics Original Article INTRODUCTION: The objective of this study was to explore potential novel biomarkers for moderate to severe lower urinary tract symptoms (LUTS) using a metabolomics-based approach, and statistical methods with significant different features than previous reported. MATERIALS AND METHODS: The patients and the controls were selected to participate in the study according to inclusion/exclusion criteria (n = 82). We recorded the following variables: International prostatic symptom score (IPSS), prostate volume, comorbidities, PSA, height, weight, triglycerides, glycemia, HDL cholesterol, and blood pressure. The study of 41 plasma metabolites was done using the nuclear magnetic resonance spectroscopy technique. First, the correlations between the metabolites and the IPSS were done using Pearson. Second, significant biomarkers of LUTS from metabolites were further analysed using a multiple linear regression model. Finally, we validated the findings using partial least square regression (PLS). RESULTS: Small to moderate correlations were found between IPSS and methionine (-0.301), threonine (-0.320), lactic acid (0.294), pyruvic acid (0.207) and 2-aminobutyric-acid (0.229). The multiple linear regression model revealed that only threonine (p = 0.022) was significantly associated with IPSS, whereas methionine (p = 0.103), lactic acid (p = 0.093), pyruvic acid (p = 0.847) and 2-aminobutyric-acid (p = 0.244) lost their significance. However, all metabolites lost their significance in the PLS model. CONCLUSION: When using the robust PLS-regression method, none of the metabolites in our analysis had a significant association with lower urinary tract symptoms. This highlights the importance of using appropriate statistical methods when exploring new biomarkers in urology. Springer US 2023-09-12 2023 /pmc/articles/PMC10497431/ /pubmed/37698748 http://dx.doi.org/10.1007/s11306-023-02046-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article Hopland-Nechita, Florin V Andersen, John R Rajalahti, Tarja Kvalheim Andreassen, Trygve Beisland, Christian Identifying possible biomarkers of lower urinary tract symptoms using metabolomics and partial least square regression |
title | Identifying possible biomarkers of lower urinary tract symptoms using metabolomics and partial least square regression |
title_full | Identifying possible biomarkers of lower urinary tract symptoms using metabolomics and partial least square regression |
title_fullStr | Identifying possible biomarkers of lower urinary tract symptoms using metabolomics and partial least square regression |
title_full_unstemmed | Identifying possible biomarkers of lower urinary tract symptoms using metabolomics and partial least square regression |
title_short | Identifying possible biomarkers of lower urinary tract symptoms using metabolomics and partial least square regression |
title_sort | identifying possible biomarkers of lower urinary tract symptoms using metabolomics and partial least square regression |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10497431/ https://www.ncbi.nlm.nih.gov/pubmed/37698748 http://dx.doi.org/10.1007/s11306-023-02046-2 |
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