Cargando…
Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers
High-grade serous ovarian cancer is the most lethal gynaecological malignancy. Detailed molecular studies have revealed marked intra-patient heterogeneity at the tumour microenvironment level, likely contributing to poor prognosis. Despite large quantities of clinical, molecular and imaging data on...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Vienna
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10497482/ https://www.ncbi.nlm.nih.gov/pubmed/37700218 http://dx.doi.org/10.1186/s41747-023-00364-7 |
_version_ | 1785105311605981184 |
---|---|
author | Hatamikia, Sepideh Nougaret, Stephanie Panico, Camilla Avesani, Giacomo Nero, Camilla Boldrini, Luca Sala, Evis Woitek, Ramona |
author_facet | Hatamikia, Sepideh Nougaret, Stephanie Panico, Camilla Avesani, Giacomo Nero, Camilla Boldrini, Luca Sala, Evis Woitek, Ramona |
author_sort | Hatamikia, Sepideh |
collection | PubMed |
description | High-grade serous ovarian cancer is the most lethal gynaecological malignancy. Detailed molecular studies have revealed marked intra-patient heterogeneity at the tumour microenvironment level, likely contributing to poor prognosis. Despite large quantities of clinical, molecular and imaging data on ovarian cancer being accumulated worldwide and the rise of high-throughput computing, data frequently remain siloed and are thus inaccessible for integrated analyses. Only a minority of studies on ovarian cancer have set out to harness artificial intelligence (AI) for the integration of multiomics data and for developing powerful algorithms that capture the characteristics of ovarian cancer at multiple scales and levels. Clinical data, serum markers, and imaging data were most frequently used, followed by genomics and transcriptomics. The current literature proves that integrative multiomics approaches outperform models based on single data types and indicates that imaging can be used for the longitudinal tracking of tumour heterogeneity in space and potentially over time. This review presents an overview of studies that integrated two or more data types to develop AI-based classifiers or prediction models. Relevance statement Integrative multiomics models for ovarian cancer outperform models using single data types for classification, prognostication, and predictive tasks. Key points • This review presents studies using multiomics and artificial intelligence in ovarian cancer. • Current literature proves that integrative multiomics outperform models using single data types. • Around 60% of studies used a combination of imaging with clinical data. • The combination of genomics and transcriptomics with imaging data was infrequently used. GRAPHICAL ABSTRACT: [Image: see text] |
format | Online Article Text |
id | pubmed-10497482 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer Vienna |
record_format | MEDLINE/PubMed |
spelling | pubmed-104974822023-09-14 Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers Hatamikia, Sepideh Nougaret, Stephanie Panico, Camilla Avesani, Giacomo Nero, Camilla Boldrini, Luca Sala, Evis Woitek, Ramona Eur Radiol Exp Narrative Review High-grade serous ovarian cancer is the most lethal gynaecological malignancy. Detailed molecular studies have revealed marked intra-patient heterogeneity at the tumour microenvironment level, likely contributing to poor prognosis. Despite large quantities of clinical, molecular and imaging data on ovarian cancer being accumulated worldwide and the rise of high-throughput computing, data frequently remain siloed and are thus inaccessible for integrated analyses. Only a minority of studies on ovarian cancer have set out to harness artificial intelligence (AI) for the integration of multiomics data and for developing powerful algorithms that capture the characteristics of ovarian cancer at multiple scales and levels. Clinical data, serum markers, and imaging data were most frequently used, followed by genomics and transcriptomics. The current literature proves that integrative multiomics approaches outperform models based on single data types and indicates that imaging can be used for the longitudinal tracking of tumour heterogeneity in space and potentially over time. This review presents an overview of studies that integrated two or more data types to develop AI-based classifiers or prediction models. Relevance statement Integrative multiomics models for ovarian cancer outperform models using single data types for classification, prognostication, and predictive tasks. Key points • This review presents studies using multiomics and artificial intelligence in ovarian cancer. • Current literature proves that integrative multiomics outperform models using single data types. • Around 60% of studies used a combination of imaging with clinical data. • The combination of genomics and transcriptomics with imaging data was infrequently used. GRAPHICAL ABSTRACT: [Image: see text] Springer Vienna 2023-09-13 /pmc/articles/PMC10497482/ /pubmed/37700218 http://dx.doi.org/10.1186/s41747-023-00364-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Narrative Review Hatamikia, Sepideh Nougaret, Stephanie Panico, Camilla Avesani, Giacomo Nero, Camilla Boldrini, Luca Sala, Evis Woitek, Ramona Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers |
title | Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers |
title_full | Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers |
title_fullStr | Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers |
title_full_unstemmed | Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers |
title_short | Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers |
title_sort | ovarian cancer beyond imaging: integration of ai and multiomics biomarkers |
topic | Narrative Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10497482/ https://www.ncbi.nlm.nih.gov/pubmed/37700218 http://dx.doi.org/10.1186/s41747-023-00364-7 |
work_keys_str_mv | AT hatamikiasepideh ovariancancerbeyondimagingintegrationofaiandmultiomicsbiomarkers AT nougaretstephanie ovariancancerbeyondimagingintegrationofaiandmultiomicsbiomarkers AT panicocamilla ovariancancerbeyondimagingintegrationofaiandmultiomicsbiomarkers AT avesanigiacomo ovariancancerbeyondimagingintegrationofaiandmultiomicsbiomarkers AT nerocamilla ovariancancerbeyondimagingintegrationofaiandmultiomicsbiomarkers AT boldriniluca ovariancancerbeyondimagingintegrationofaiandmultiomicsbiomarkers AT salaevis ovariancancerbeyondimagingintegrationofaiandmultiomicsbiomarkers AT woitekramona ovariancancerbeyondimagingintegrationofaiandmultiomicsbiomarkers |