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Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers

High-grade serous ovarian cancer is the most lethal gynaecological malignancy. Detailed molecular studies have revealed marked intra-patient heterogeneity at the tumour microenvironment level, likely contributing to poor prognosis. Despite large quantities of clinical, molecular and imaging data on...

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Autores principales: Hatamikia, Sepideh, Nougaret, Stephanie, Panico, Camilla, Avesani, Giacomo, Nero, Camilla, Boldrini, Luca, Sala, Evis, Woitek, Ramona
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Vienna 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10497482/
https://www.ncbi.nlm.nih.gov/pubmed/37700218
http://dx.doi.org/10.1186/s41747-023-00364-7
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author Hatamikia, Sepideh
Nougaret, Stephanie
Panico, Camilla
Avesani, Giacomo
Nero, Camilla
Boldrini, Luca
Sala, Evis
Woitek, Ramona
author_facet Hatamikia, Sepideh
Nougaret, Stephanie
Panico, Camilla
Avesani, Giacomo
Nero, Camilla
Boldrini, Luca
Sala, Evis
Woitek, Ramona
author_sort Hatamikia, Sepideh
collection PubMed
description High-grade serous ovarian cancer is the most lethal gynaecological malignancy. Detailed molecular studies have revealed marked intra-patient heterogeneity at the tumour microenvironment level, likely contributing to poor prognosis. Despite large quantities of clinical, molecular and imaging data on ovarian cancer being accumulated worldwide and the rise of high-throughput computing, data frequently remain siloed and are thus inaccessible for integrated analyses. Only a minority of studies on ovarian cancer have set out to harness artificial intelligence (AI) for the integration of multiomics data and for developing powerful algorithms that capture the characteristics of ovarian cancer at multiple scales and levels. Clinical data, serum markers, and imaging data were most frequently used, followed by genomics and transcriptomics. The current literature proves that integrative multiomics approaches outperform models based on single data types and indicates that imaging can be used for the longitudinal tracking of tumour heterogeneity in space and potentially over time. This review presents an overview of studies that integrated two or more data types to develop AI-based classifiers or prediction models. Relevance statement Integrative multiomics models for ovarian cancer outperform models using single data types for classification, prognostication, and predictive tasks. Key points • This review presents studies using multiomics and artificial intelligence in ovarian cancer. • Current literature proves that integrative multiomics outperform models using single data types. • Around 60% of studies used a combination of imaging with clinical data. • The combination of genomics and transcriptomics with imaging data was infrequently used. GRAPHICAL ABSTRACT: [Image: see text]
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spelling pubmed-104974822023-09-14 Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers Hatamikia, Sepideh Nougaret, Stephanie Panico, Camilla Avesani, Giacomo Nero, Camilla Boldrini, Luca Sala, Evis Woitek, Ramona Eur Radiol Exp Narrative Review High-grade serous ovarian cancer is the most lethal gynaecological malignancy. Detailed molecular studies have revealed marked intra-patient heterogeneity at the tumour microenvironment level, likely contributing to poor prognosis. Despite large quantities of clinical, molecular and imaging data on ovarian cancer being accumulated worldwide and the rise of high-throughput computing, data frequently remain siloed and are thus inaccessible for integrated analyses. Only a minority of studies on ovarian cancer have set out to harness artificial intelligence (AI) for the integration of multiomics data and for developing powerful algorithms that capture the characteristics of ovarian cancer at multiple scales and levels. Clinical data, serum markers, and imaging data were most frequently used, followed by genomics and transcriptomics. The current literature proves that integrative multiomics approaches outperform models based on single data types and indicates that imaging can be used for the longitudinal tracking of tumour heterogeneity in space and potentially over time. This review presents an overview of studies that integrated two or more data types to develop AI-based classifiers or prediction models. Relevance statement Integrative multiomics models for ovarian cancer outperform models using single data types for classification, prognostication, and predictive tasks. Key points • This review presents studies using multiomics and artificial intelligence in ovarian cancer. • Current literature proves that integrative multiomics outperform models using single data types. • Around 60% of studies used a combination of imaging with clinical data. • The combination of genomics and transcriptomics with imaging data was infrequently used. GRAPHICAL ABSTRACT: [Image: see text] Springer Vienna 2023-09-13 /pmc/articles/PMC10497482/ /pubmed/37700218 http://dx.doi.org/10.1186/s41747-023-00364-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Narrative Review
Hatamikia, Sepideh
Nougaret, Stephanie
Panico, Camilla
Avesani, Giacomo
Nero, Camilla
Boldrini, Luca
Sala, Evis
Woitek, Ramona
Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers
title Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers
title_full Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers
title_fullStr Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers
title_full_unstemmed Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers
title_short Ovarian cancer beyond imaging: integration of AI and multiomics biomarkers
title_sort ovarian cancer beyond imaging: integration of ai and multiomics biomarkers
topic Narrative Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10497482/
https://www.ncbi.nlm.nih.gov/pubmed/37700218
http://dx.doi.org/10.1186/s41747-023-00364-7
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