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Two-step method for rapid isolation of genomic DNA and validation of R81T insecticide resistance mutation in Myzus persicae

Isolation and amplification of nucleic acid (DNA) is considered a vital and potent instrument in molecular biological research. However, its functioning outside of a laboratory setting is difficult because of complex procedures that demand expert personnel and expensive equipment in addition to the...

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Autores principales: Sial, Muhammad Umair, Farooq, Tahir, Khalaf, Luaay Kahtan, Rahman, Saqib, Asad, Muhammad, Ahamad Paray, Bilal
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10497781/
https://www.ncbi.nlm.nih.gov/pubmed/37711971
http://dx.doi.org/10.1016/j.sjbs.2023.103791
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author Sial, Muhammad Umair
Farooq, Tahir
Khalaf, Luaay Kahtan
Rahman, Saqib
Asad, Muhammad
Ahamad Paray, Bilal
author_facet Sial, Muhammad Umair
Farooq, Tahir
Khalaf, Luaay Kahtan
Rahman, Saqib
Asad, Muhammad
Ahamad Paray, Bilal
author_sort Sial, Muhammad Umair
collection PubMed
description Isolation and amplification of nucleic acid (DNA) is considered a vital and potent instrument in molecular biological research. However, its functioning outside of a laboratory setting is difficult because of complex procedures that demand expert personnel and expensive equipment in addition to the fulfillment of several additional requirements. DNA isolation from minute insects is sometimes difficult, making diagnostic and genotyping procedures problematic. Thus, the current work offers a high-throughput, cost-effective, straightforward, and faster approach for isolating DNA from the aphid Myzus persicae. Intriguingly, two-step DNA extraction process yielded a high yield of extremely pure genomic DNA and required only 10 s to complete. PCR investigation aiming at amplifying the non-synonymous R81T region on the loop D site of the nAChR gene of M. persicae was subsequently utilized to successfully validate the recovered DNA. Moreover, the proposed method was compared in terms of yield and purity with conventionally used DNA isolation methods including, phenol:chloroform, salt out, and commercially available kits. In conclusion, this newly developed method would enable researchers to quickly process many biological samples used to analyze genetic diversity, mutant screening, and large spectrum diagnosis both in laboratory and field conditions.
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spelling pubmed-104977812023-09-14 Two-step method for rapid isolation of genomic DNA and validation of R81T insecticide resistance mutation in Myzus persicae Sial, Muhammad Umair Farooq, Tahir Khalaf, Luaay Kahtan Rahman, Saqib Asad, Muhammad Ahamad Paray, Bilal Saudi J Biol Sci Original Article Isolation and amplification of nucleic acid (DNA) is considered a vital and potent instrument in molecular biological research. However, its functioning outside of a laboratory setting is difficult because of complex procedures that demand expert personnel and expensive equipment in addition to the fulfillment of several additional requirements. DNA isolation from minute insects is sometimes difficult, making diagnostic and genotyping procedures problematic. Thus, the current work offers a high-throughput, cost-effective, straightforward, and faster approach for isolating DNA from the aphid Myzus persicae. Intriguingly, two-step DNA extraction process yielded a high yield of extremely pure genomic DNA and required only 10 s to complete. PCR investigation aiming at amplifying the non-synonymous R81T region on the loop D site of the nAChR gene of M. persicae was subsequently utilized to successfully validate the recovered DNA. Moreover, the proposed method was compared in terms of yield and purity with conventionally used DNA isolation methods including, phenol:chloroform, salt out, and commercially available kits. In conclusion, this newly developed method would enable researchers to quickly process many biological samples used to analyze genetic diversity, mutant screening, and large spectrum diagnosis both in laboratory and field conditions. Elsevier 2023-11 2023-08-29 /pmc/articles/PMC10497781/ /pubmed/37711971 http://dx.doi.org/10.1016/j.sjbs.2023.103791 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Sial, Muhammad Umair
Farooq, Tahir
Khalaf, Luaay Kahtan
Rahman, Saqib
Asad, Muhammad
Ahamad Paray, Bilal
Two-step method for rapid isolation of genomic DNA and validation of R81T insecticide resistance mutation in Myzus persicae
title Two-step method for rapid isolation of genomic DNA and validation of R81T insecticide resistance mutation in Myzus persicae
title_full Two-step method for rapid isolation of genomic DNA and validation of R81T insecticide resistance mutation in Myzus persicae
title_fullStr Two-step method for rapid isolation of genomic DNA and validation of R81T insecticide resistance mutation in Myzus persicae
title_full_unstemmed Two-step method for rapid isolation of genomic DNA and validation of R81T insecticide resistance mutation in Myzus persicae
title_short Two-step method for rapid isolation of genomic DNA and validation of R81T insecticide resistance mutation in Myzus persicae
title_sort two-step method for rapid isolation of genomic dna and validation of r81t insecticide resistance mutation in myzus persicae
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10497781/
https://www.ncbi.nlm.nih.gov/pubmed/37711971
http://dx.doi.org/10.1016/j.sjbs.2023.103791
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