Cargando…

Early plasma proteomic biomarkers and prediction model of acute respiratory distress syndrome after cardiopulmonary bypass: a prospective nested cohort study

BACKGROUND: Early recognition of the risk of acute respiratory distress syndrome (ARDS) after cardiopulmonary bypass (CPB) may improve clinical outcomes. The main objective of this study was to identify proteomic biomarkers and develop an early prediction model for CPB-ARDS. METHODS: The authors con...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Yu, Chen, Lin, Yao, Chengye, Wang, Tingting, Wu, Jing, Shang, You, Li, Bo, Xia, Haifa, Huang, Shiqian, Wang, Fuquan, Wen, Shuyu, Huang, Shaoxin, Lin, Yun, Dong, Nianguo, Yao, Shanglong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10498873/
https://www.ncbi.nlm.nih.gov/pubmed/37528797
http://dx.doi.org/10.1097/JS9.0000000000000434
_version_ 1785105613350502400
author Wang, Yu
Chen, Lin
Yao, Chengye
Wang, Tingting
Wu, Jing
Shang, You
Li, Bo
Xia, Haifa
Huang, Shiqian
Wang, Fuquan
Wen, Shuyu
Huang, Shaoxin
Lin, Yun
Dong, Nianguo
Yao, Shanglong
author_facet Wang, Yu
Chen, Lin
Yao, Chengye
Wang, Tingting
Wu, Jing
Shang, You
Li, Bo
Xia, Haifa
Huang, Shiqian
Wang, Fuquan
Wen, Shuyu
Huang, Shaoxin
Lin, Yun
Dong, Nianguo
Yao, Shanglong
author_sort Wang, Yu
collection PubMed
description BACKGROUND: Early recognition of the risk of acute respiratory distress syndrome (ARDS) after cardiopulmonary bypass (CPB) may improve clinical outcomes. The main objective of this study was to identify proteomic biomarkers and develop an early prediction model for CPB-ARDS. METHODS: The authors conducted three prospective nested cohort studies of all consecutive patients undergoing cardiac surgery with CPB at Union Hospital of Tongji Medical College Hospital. Plasma proteomic profiling was performed in ARDS patients and matched controls (Cohort 1, April 2021–July 2021) at multiple timepoints: before CPB (T1), at the end of CPB (T2), and 24 h after CPB (T3). Then, for Cohort 2 (August 2021–July 2022), biomarker expression was measured and verified in the plasma. Furthermore, lung ischemia/reperfusion injury (LIRI) models and sham-operation were established in 50 rats to explore the tissue-level expression of biomarkers identified in the aforementioned clinical cohort. Subsequently, a machine learning-based prediction model incorporating protein and clinical predictors from Cohort 2 for CPB-ARDS was developed and internally validated. Model performance was externally validated on Cohort 3 (January 2023–March 2023). RESULTS: A total of 709 proteins were identified, with 9, 29, and 35 altered proteins between ARDS cases and controls at T1, T2, and T3, respectively, in Cohort 1. Following quantitative verification of several predictive proteins in Cohort 2, higher levels of thioredoxin domain containing 5 (TXNDC5), cathepsin L (CTSL), and NPC intracellular cholesterol transporter 2 (NPC2) at T2 were observed in CPB-ARDS patients. A dynamic online predictive nomogram was developed based on three proteins (TXNDC5, CTSL, and NPC2) and two clinical risk factors (CPB time and massive blood transfusion), with excellent performance (precision: 83.33%, sensitivity: 93.33%, specificity: 61.16%, and F1 score: 85.05%). The mean area under the receiver operating characteristics curve (AUC) of the model after 10-fold cross-validation was 0.839 (95% CI: 0.824–0.855). Model discrimination and calibration were maintained during external validation dataset testing, with an AUC of 0.820 (95% CI: 0.685–0.955) and a Brier Score of 0.177 (95% CI: 0.147–0.206). Moreover, the considerably overexpressed TXNDC5 and CTSL proteins identified in the plasma of patients with CPB-ARDS, exhibited a significant upregulation in the lung tissue of LIRI rats. CONCLUSIONS: This study identified several novel predictive biomarkers, developed and validated a practical prediction tool using biomarker and clinical factor combinations for individual prediction of CPB-ARDS risk. Assessing the plasma TXNDC5, CTSL, and NPC2 levels might identify patients who warrant closer follow-up and intensified therapy for ARDS prevention following major surgery.
format Online
Article
Text
id pubmed-10498873
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Lippincott Williams & Wilkins
record_format MEDLINE/PubMed
spelling pubmed-104988732023-09-14 Early plasma proteomic biomarkers and prediction model of acute respiratory distress syndrome after cardiopulmonary bypass: a prospective nested cohort study Wang, Yu Chen, Lin Yao, Chengye Wang, Tingting Wu, Jing Shang, You Li, Bo Xia, Haifa Huang, Shiqian Wang, Fuquan Wen, Shuyu Huang, Shaoxin Lin, Yun Dong, Nianguo Yao, Shanglong Int J Surg Original Research BACKGROUND: Early recognition of the risk of acute respiratory distress syndrome (ARDS) after cardiopulmonary bypass (CPB) may improve clinical outcomes. The main objective of this study was to identify proteomic biomarkers and develop an early prediction model for CPB-ARDS. METHODS: The authors conducted three prospective nested cohort studies of all consecutive patients undergoing cardiac surgery with CPB at Union Hospital of Tongji Medical College Hospital. Plasma proteomic profiling was performed in ARDS patients and matched controls (Cohort 1, April 2021–July 2021) at multiple timepoints: before CPB (T1), at the end of CPB (T2), and 24 h after CPB (T3). Then, for Cohort 2 (August 2021–July 2022), biomarker expression was measured and verified in the plasma. Furthermore, lung ischemia/reperfusion injury (LIRI) models and sham-operation were established in 50 rats to explore the tissue-level expression of biomarkers identified in the aforementioned clinical cohort. Subsequently, a machine learning-based prediction model incorporating protein and clinical predictors from Cohort 2 for CPB-ARDS was developed and internally validated. Model performance was externally validated on Cohort 3 (January 2023–March 2023). RESULTS: A total of 709 proteins were identified, with 9, 29, and 35 altered proteins between ARDS cases and controls at T1, T2, and T3, respectively, in Cohort 1. Following quantitative verification of several predictive proteins in Cohort 2, higher levels of thioredoxin domain containing 5 (TXNDC5), cathepsin L (CTSL), and NPC intracellular cholesterol transporter 2 (NPC2) at T2 were observed in CPB-ARDS patients. A dynamic online predictive nomogram was developed based on three proteins (TXNDC5, CTSL, and NPC2) and two clinical risk factors (CPB time and massive blood transfusion), with excellent performance (precision: 83.33%, sensitivity: 93.33%, specificity: 61.16%, and F1 score: 85.05%). The mean area under the receiver operating characteristics curve (AUC) of the model after 10-fold cross-validation was 0.839 (95% CI: 0.824–0.855). Model discrimination and calibration were maintained during external validation dataset testing, with an AUC of 0.820 (95% CI: 0.685–0.955) and a Brier Score of 0.177 (95% CI: 0.147–0.206). Moreover, the considerably overexpressed TXNDC5 and CTSL proteins identified in the plasma of patients with CPB-ARDS, exhibited a significant upregulation in the lung tissue of LIRI rats. CONCLUSIONS: This study identified several novel predictive biomarkers, developed and validated a practical prediction tool using biomarker and clinical factor combinations for individual prediction of CPB-ARDS risk. Assessing the plasma TXNDC5, CTSL, and NPC2 levels might identify patients who warrant closer follow-up and intensified therapy for ARDS prevention following major surgery. Lippincott Williams & Wilkins 2023-08-01 /pmc/articles/PMC10498873/ /pubmed/37528797 http://dx.doi.org/10.1097/JS9.0000000000000434 Text en Copyright © 2023 The Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (https://creativecommons.org/licenses/by-nc/4.0/) (CCBY-NC), where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/)
spellingShingle Original Research
Wang, Yu
Chen, Lin
Yao, Chengye
Wang, Tingting
Wu, Jing
Shang, You
Li, Bo
Xia, Haifa
Huang, Shiqian
Wang, Fuquan
Wen, Shuyu
Huang, Shaoxin
Lin, Yun
Dong, Nianguo
Yao, Shanglong
Early plasma proteomic biomarkers and prediction model of acute respiratory distress syndrome after cardiopulmonary bypass: a prospective nested cohort study
title Early plasma proteomic biomarkers and prediction model of acute respiratory distress syndrome after cardiopulmonary bypass: a prospective nested cohort study
title_full Early plasma proteomic biomarkers and prediction model of acute respiratory distress syndrome after cardiopulmonary bypass: a prospective nested cohort study
title_fullStr Early plasma proteomic biomarkers and prediction model of acute respiratory distress syndrome after cardiopulmonary bypass: a prospective nested cohort study
title_full_unstemmed Early plasma proteomic biomarkers and prediction model of acute respiratory distress syndrome after cardiopulmonary bypass: a prospective nested cohort study
title_short Early plasma proteomic biomarkers and prediction model of acute respiratory distress syndrome after cardiopulmonary bypass: a prospective nested cohort study
title_sort early plasma proteomic biomarkers and prediction model of acute respiratory distress syndrome after cardiopulmonary bypass: a prospective nested cohort study
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10498873/
https://www.ncbi.nlm.nih.gov/pubmed/37528797
http://dx.doi.org/10.1097/JS9.0000000000000434
work_keys_str_mv AT wangyu earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT chenlin earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT yaochengye earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT wangtingting earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT wujing earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT shangyou earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT libo earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT xiahaifa earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT huangshiqian earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT wangfuquan earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT wenshuyu earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT huangshaoxin earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT linyun earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT dongnianguo earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy
AT yaoshanglong earlyplasmaproteomicbiomarkersandpredictionmodelofacuterespiratorydistresssyndromeaftercardiopulmonarybypassaprospectivenestedcohortstudy