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The diffusion metrics of African swine fever in wild boar

To control African swine fever (ASF) efficiently, easily interpretable metrics of the outbreak dynamics are needed to plan and adapt the required measures. We found that the spread pattern of African Swine Fever cases in wild boar follows the mechanics of a diffusion process, at least in the early p...

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Autores principales: Lentz, Hartmut H. K., Bergmann, Hannes, Conraths, Franz J., Schulz, Jana, Sauter-Louis, Carola
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10499946/
https://www.ncbi.nlm.nih.gov/pubmed/37704714
http://dx.doi.org/10.1038/s41598-023-42300-0
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author Lentz, Hartmut H. K.
Bergmann, Hannes
Conraths, Franz J.
Schulz, Jana
Sauter-Louis, Carola
author_facet Lentz, Hartmut H. K.
Bergmann, Hannes
Conraths, Franz J.
Schulz, Jana
Sauter-Louis, Carola
author_sort Lentz, Hartmut H. K.
collection PubMed
description To control African swine fever (ASF) efficiently, easily interpretable metrics of the outbreak dynamics are needed to plan and adapt the required measures. We found that the spread pattern of African Swine Fever cases in wild boar follows the mechanics of a diffusion process, at least in the early phase, for the cases that occurred in Germany. Following incursion into a previously unaffected area, infection disseminates locally within a naive and abundant wild boar population. Using real case data for Germany, we derive statistics about the time differences and distances between consecutive case reports. With the use of these statistics, we generate an ensemble of random walkers (continuous time random walks, CTRW) that resemble the properties of the observed outbreak pattern as one possible realization of all possible disease dissemination patterns. The trained random walker ensemble yields the diffusion constant, the affected area, and the outbreak velocity of early ASF spread in wild boar. These methods are easy to interpret, robust, and may be adapted for different regions. Therefore, diffusion metrics can be useful descriptors of early disease dynamics and help facilitate efficient control of African Swine Fever.
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spelling pubmed-104999462023-09-15 The diffusion metrics of African swine fever in wild boar Lentz, Hartmut H. K. Bergmann, Hannes Conraths, Franz J. Schulz, Jana Sauter-Louis, Carola Sci Rep Article To control African swine fever (ASF) efficiently, easily interpretable metrics of the outbreak dynamics are needed to plan and adapt the required measures. We found that the spread pattern of African Swine Fever cases in wild boar follows the mechanics of a diffusion process, at least in the early phase, for the cases that occurred in Germany. Following incursion into a previously unaffected area, infection disseminates locally within a naive and abundant wild boar population. Using real case data for Germany, we derive statistics about the time differences and distances between consecutive case reports. With the use of these statistics, we generate an ensemble of random walkers (continuous time random walks, CTRW) that resemble the properties of the observed outbreak pattern as one possible realization of all possible disease dissemination patterns. The trained random walker ensemble yields the diffusion constant, the affected area, and the outbreak velocity of early ASF spread in wild boar. These methods are easy to interpret, robust, and may be adapted for different regions. Therefore, diffusion metrics can be useful descriptors of early disease dynamics and help facilitate efficient control of African Swine Fever. Nature Publishing Group UK 2023-09-13 /pmc/articles/PMC10499946/ /pubmed/37704714 http://dx.doi.org/10.1038/s41598-023-42300-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Lentz, Hartmut H. K.
Bergmann, Hannes
Conraths, Franz J.
Schulz, Jana
Sauter-Louis, Carola
The diffusion metrics of African swine fever in wild boar
title The diffusion metrics of African swine fever in wild boar
title_full The diffusion metrics of African swine fever in wild boar
title_fullStr The diffusion metrics of African swine fever in wild boar
title_full_unstemmed The diffusion metrics of African swine fever in wild boar
title_short The diffusion metrics of African swine fever in wild boar
title_sort diffusion metrics of african swine fever in wild boar
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10499946/
https://www.ncbi.nlm.nih.gov/pubmed/37704714
http://dx.doi.org/10.1038/s41598-023-42300-0
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