Precision metagenomics sequencing for food safety: hybrid assembly of Shiga toxin-producing Escherichia coli in enriched agricultural water

Culture-independent metagenomic sequencing of enriched agricultural water could expedite the detection and virulotyping of Shiga toxin-producing Escherichia coli (STEC). We previously determined the limits of a complete, closed metagenome-assembled genome (MAG) assembly and of a complete, fragmented...

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Detalles Bibliográficos
Autores principales: Maguire, Meghan, Ramachandran, Padmini, Tallent, Sandra, Mammel, Mark K., Brown, Eric W., Allard, Marc W., Musser, Steven M., González-Escalona, Narjol
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Microbiology
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10500926/
https://www.ncbi.nlm.nih.gov/pubmed/37720160
http://dx.doi.org/10.3389/fmicb.2023.1221668

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