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Biosensor-integrated transposon mutagenesis reveals rv0158 as a coordinator of redox homeostasis in Mycobacterium tuberculosis

Mycobacterium tuberculosis (Mtb) is evolutionarily equipped to resist exogenous reactive oxygen species (ROS) but shows vulnerability to an increase in endogenous ROS (eROS). Since eROS is an unavoidable consequence of aerobic metabolism, understanding how Mtb manages eROS levels is essential yet ne...

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Autores principales: Shee, Somnath, Veetil, Reshma T, Mohanraj, Karthikeyan, Das, Mayashree, Malhotra, Nitish, Bandopadhyay, Devleena, Beig, Hussain, Birua, Shalini, Niphadkar, Shreyas, Nagarajan, Sathya Narayanan, Sinha, Vikrant Kumar, Thakur, Chandrani, Rajmani, Raju S, Chandra, Nagasuma, Laxman, Sunil, Singh, Mahavir, Samal, Areejit, Seshasayee, Aswin N, Singh, Amit
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10501769/
https://www.ncbi.nlm.nih.gov/pubmed/37642294
http://dx.doi.org/10.7554/eLife.80218
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author Shee, Somnath
Veetil, Reshma T
Mohanraj, Karthikeyan
Das, Mayashree
Malhotra, Nitish
Bandopadhyay, Devleena
Beig, Hussain
Birua, Shalini
Niphadkar, Shreyas
Nagarajan, Sathya Narayanan
Sinha, Vikrant Kumar
Thakur, Chandrani
Rajmani, Raju S
Chandra, Nagasuma
Laxman, Sunil
Singh, Mahavir
Samal, Areejit
Seshasayee, Aswin N
Singh, Amit
author_facet Shee, Somnath
Veetil, Reshma T
Mohanraj, Karthikeyan
Das, Mayashree
Malhotra, Nitish
Bandopadhyay, Devleena
Beig, Hussain
Birua, Shalini
Niphadkar, Shreyas
Nagarajan, Sathya Narayanan
Sinha, Vikrant Kumar
Thakur, Chandrani
Rajmani, Raju S
Chandra, Nagasuma
Laxman, Sunil
Singh, Mahavir
Samal, Areejit
Seshasayee, Aswin N
Singh, Amit
author_sort Shee, Somnath
collection PubMed
description Mycobacterium tuberculosis (Mtb) is evolutionarily equipped to resist exogenous reactive oxygen species (ROS) but shows vulnerability to an increase in endogenous ROS (eROS). Since eROS is an unavoidable consequence of aerobic metabolism, understanding how Mtb manages eROS levels is essential yet needs to be characterized. By combining the Mrx1-roGFP2 redox biosensor with transposon mutagenesis, we identified 368 genes (redoxosome) responsible for maintaining homeostatic levels of eROS in Mtb. Integrating redoxosome with a global network of transcriptional regulators revealed a hypothetical protein (Rv0158) as a critical node managing eROS in Mtb. Disruption of rv0158 (rv0158 KO) impaired growth, redox balance, respiration, and metabolism of Mtb on glucose but not on fatty acids. Importantly, rv0158 KO exhibited enhanced growth on propionate, and the Rv0158 protein directly binds to methylmalonyl-CoA, a key intermediate in propionate catabolism. Metabolite profiling, ChIP-Seq, and gene-expression analyses indicate that Rv0158 manages metabolic neutralization of propionate toxicity by regulating the methylcitrate cycle. Disruption of rv0158 enhanced the sensitivity of Mtb to oxidative stress, nitric oxide, and anti-TB drugs. Lastly, rv0158 KO showed poor survival in macrophages and persistence defect in mice. Our results suggest that Rv0158 is a metabolic integrator for carbon metabolism and redox balance in Mtb.
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spelling pubmed-105017692023-09-15 Biosensor-integrated transposon mutagenesis reveals rv0158 as a coordinator of redox homeostasis in Mycobacterium tuberculosis Shee, Somnath Veetil, Reshma T Mohanraj, Karthikeyan Das, Mayashree Malhotra, Nitish Bandopadhyay, Devleena Beig, Hussain Birua, Shalini Niphadkar, Shreyas Nagarajan, Sathya Narayanan Sinha, Vikrant Kumar Thakur, Chandrani Rajmani, Raju S Chandra, Nagasuma Laxman, Sunil Singh, Mahavir Samal, Areejit Seshasayee, Aswin N Singh, Amit eLife Microbiology and Infectious Disease Mycobacterium tuberculosis (Mtb) is evolutionarily equipped to resist exogenous reactive oxygen species (ROS) but shows vulnerability to an increase in endogenous ROS (eROS). Since eROS is an unavoidable consequence of aerobic metabolism, understanding how Mtb manages eROS levels is essential yet needs to be characterized. By combining the Mrx1-roGFP2 redox biosensor with transposon mutagenesis, we identified 368 genes (redoxosome) responsible for maintaining homeostatic levels of eROS in Mtb. Integrating redoxosome with a global network of transcriptional regulators revealed a hypothetical protein (Rv0158) as a critical node managing eROS in Mtb. Disruption of rv0158 (rv0158 KO) impaired growth, redox balance, respiration, and metabolism of Mtb on glucose but not on fatty acids. Importantly, rv0158 KO exhibited enhanced growth on propionate, and the Rv0158 protein directly binds to methylmalonyl-CoA, a key intermediate in propionate catabolism. Metabolite profiling, ChIP-Seq, and gene-expression analyses indicate that Rv0158 manages metabolic neutralization of propionate toxicity by regulating the methylcitrate cycle. Disruption of rv0158 enhanced the sensitivity of Mtb to oxidative stress, nitric oxide, and anti-TB drugs. Lastly, rv0158 KO showed poor survival in macrophages and persistence defect in mice. Our results suggest that Rv0158 is a metabolic integrator for carbon metabolism and redox balance in Mtb. eLife Sciences Publications, Ltd 2023-08-29 /pmc/articles/PMC10501769/ /pubmed/37642294 http://dx.doi.org/10.7554/eLife.80218 Text en © 2023, Shee et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Microbiology and Infectious Disease
Shee, Somnath
Veetil, Reshma T
Mohanraj, Karthikeyan
Das, Mayashree
Malhotra, Nitish
Bandopadhyay, Devleena
Beig, Hussain
Birua, Shalini
Niphadkar, Shreyas
Nagarajan, Sathya Narayanan
Sinha, Vikrant Kumar
Thakur, Chandrani
Rajmani, Raju S
Chandra, Nagasuma
Laxman, Sunil
Singh, Mahavir
Samal, Areejit
Seshasayee, Aswin N
Singh, Amit
Biosensor-integrated transposon mutagenesis reveals rv0158 as a coordinator of redox homeostasis in Mycobacterium tuberculosis
title Biosensor-integrated transposon mutagenesis reveals rv0158 as a coordinator of redox homeostasis in Mycobacterium tuberculosis
title_full Biosensor-integrated transposon mutagenesis reveals rv0158 as a coordinator of redox homeostasis in Mycobacterium tuberculosis
title_fullStr Biosensor-integrated transposon mutagenesis reveals rv0158 as a coordinator of redox homeostasis in Mycobacterium tuberculosis
title_full_unstemmed Biosensor-integrated transposon mutagenesis reveals rv0158 as a coordinator of redox homeostasis in Mycobacterium tuberculosis
title_short Biosensor-integrated transposon mutagenesis reveals rv0158 as a coordinator of redox homeostasis in Mycobacterium tuberculosis
title_sort biosensor-integrated transposon mutagenesis reveals rv0158 as a coordinator of redox homeostasis in mycobacterium tuberculosis
topic Microbiology and Infectious Disease
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10501769/
https://www.ncbi.nlm.nih.gov/pubmed/37642294
http://dx.doi.org/10.7554/eLife.80218
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