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μ- PBWT: a lightweight r-indexing of the PBWT for storing and querying UK Biobank data
MOTIVATION: The Positional Burrows–Wheeler Transform ([Formula: see text]) is a data structure that indexes haplotype sequences in a manner that enables finding maximal haplotype matches in h sequences containing w variation sites in [Formula: see text] time. This represents a significant improvemen...
Autores principales: | Cozzi, Davide, Rossi, Massimiliano, Rubinacci, Simone, Gagie, Travis, Köppl, Dominik, Boucher, Christina, Bonizzoni, Paola |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10502237/ https://www.ncbi.nlm.nih.gov/pubmed/37688560 http://dx.doi.org/10.1093/bioinformatics/btad552 |
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