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COVID-19 and cholesterol biosynthesis: Towards innovative decision support systems

With COVID-19 becoming endemic, there is a continuing need to find biomarkers characterizing the disease and aiding in patient stratification. We studied the relation between COVID-19 and cholesterol biosynthesis by comparing 10 intermediates of cholesterol biosynthesis during the hospitalization of...

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Autores principales: Kočar, Eva, Katz, Sonja, Pušnik, Žiga, Bogovič, Petra, Turel, Gabriele, Skubic, Cene, Režen, Tadeja, Strle, Franc, Martins dos Santos, Vitor A.P., Mraz, Miha, Moškon, Miha, Rozman, Damjana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10502404/
https://www.ncbi.nlm.nih.gov/pubmed/37720097
http://dx.doi.org/10.1016/j.isci.2023.107799
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author Kočar, Eva
Katz, Sonja
Pušnik, Žiga
Bogovič, Petra
Turel, Gabriele
Skubic, Cene
Režen, Tadeja
Strle, Franc
Martins dos Santos, Vitor A.P.
Mraz, Miha
Moškon, Miha
Rozman, Damjana
author_facet Kočar, Eva
Katz, Sonja
Pušnik, Žiga
Bogovič, Petra
Turel, Gabriele
Skubic, Cene
Režen, Tadeja
Strle, Franc
Martins dos Santos, Vitor A.P.
Mraz, Miha
Moškon, Miha
Rozman, Damjana
author_sort Kočar, Eva
collection PubMed
description With COVID-19 becoming endemic, there is a continuing need to find biomarkers characterizing the disease and aiding in patient stratification. We studied the relation between COVID-19 and cholesterol biosynthesis by comparing 10 intermediates of cholesterol biosynthesis during the hospitalization of 164 patients (admission, disease deterioration, discharge) admitted to the University Medical Center of Ljubljana. The concentrations of zymosterol, 24-dehydrolathosterol, desmosterol, and zymostenol were significantly altered in COVID-19 patients. We further developed a predictive model for disease severity based on clinical parameters alone and their combination with a subset of sterols. Our machine learning models applying 8 clinical parameters predicted disease severity with excellent accuracy (AUC = 0.96), showing substantial improvement over current clinical risk scores. After including sterols, model performance remained better than COVID-GRAM. This is the first study to examine cholesterol biosynthesis during COVID-19 and shows that a subset of cholesterol-related sterols is associated with the severity of COVID-19.
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spelling pubmed-105024042023-09-16 COVID-19 and cholesterol biosynthesis: Towards innovative decision support systems Kočar, Eva Katz, Sonja Pušnik, Žiga Bogovič, Petra Turel, Gabriele Skubic, Cene Režen, Tadeja Strle, Franc Martins dos Santos, Vitor A.P. Mraz, Miha Moškon, Miha Rozman, Damjana iScience Article With COVID-19 becoming endemic, there is a continuing need to find biomarkers characterizing the disease and aiding in patient stratification. We studied the relation between COVID-19 and cholesterol biosynthesis by comparing 10 intermediates of cholesterol biosynthesis during the hospitalization of 164 patients (admission, disease deterioration, discharge) admitted to the University Medical Center of Ljubljana. The concentrations of zymosterol, 24-dehydrolathosterol, desmosterol, and zymostenol were significantly altered in COVID-19 patients. We further developed a predictive model for disease severity based on clinical parameters alone and their combination with a subset of sterols. Our machine learning models applying 8 clinical parameters predicted disease severity with excellent accuracy (AUC = 0.96), showing substantial improvement over current clinical risk scores. After including sterols, model performance remained better than COVID-GRAM. This is the first study to examine cholesterol biosynthesis during COVID-19 and shows that a subset of cholesterol-related sterols is associated with the severity of COVID-19. Elsevier 2023-08-31 /pmc/articles/PMC10502404/ /pubmed/37720097 http://dx.doi.org/10.1016/j.isci.2023.107799 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Kočar, Eva
Katz, Sonja
Pušnik, Žiga
Bogovič, Petra
Turel, Gabriele
Skubic, Cene
Režen, Tadeja
Strle, Franc
Martins dos Santos, Vitor A.P.
Mraz, Miha
Moškon, Miha
Rozman, Damjana
COVID-19 and cholesterol biosynthesis: Towards innovative decision support systems
title COVID-19 and cholesterol biosynthesis: Towards innovative decision support systems
title_full COVID-19 and cholesterol biosynthesis: Towards innovative decision support systems
title_fullStr COVID-19 and cholesterol biosynthesis: Towards innovative decision support systems
title_full_unstemmed COVID-19 and cholesterol biosynthesis: Towards innovative decision support systems
title_short COVID-19 and cholesterol biosynthesis: Towards innovative decision support systems
title_sort covid-19 and cholesterol biosynthesis: towards innovative decision support systems
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10502404/
https://www.ncbi.nlm.nih.gov/pubmed/37720097
http://dx.doi.org/10.1016/j.isci.2023.107799
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