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2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative
OBJECTIVES: This release note describes the Maize GxE project datasets within the Genomes to Fields (G2F) Initiative. The Maize GxE project aims to understand genotype by environment (GxE) interactions and use the information collected to improve resource allocation efficiency and increase genotype...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10502993/ https://www.ncbi.nlm.nih.gov/pubmed/37710302 http://dx.doi.org/10.1186/s13104-023-06430-y |
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author | Lima, Dayane Cristina Aviles, Alejandro Castro Alpers, Ryan Timothy Perkins, Alden Schoemaker, Dylan L Costa, Martin Michel, Kathryn J. Kaeppler, Shawn Ertl, David Romay, Maria Cinta Gage, Joseph L. Holland, James Beissinger, Timothy Bohn, Martin Buckler, Edward Edwards, Jode Flint-Garcia, Sherry Gore, Michael A. Hirsch, Candice N. Knoll, Joseph E. McKay, John Minyo, Richard Murray, Seth C. Schnable, James Sekhon, Rajandeep S. Singh, Maninder P. Sparks, Erin E. Thomison, Peter Thompson, Addie Tuinstra, Mitchell Wallace, Jason Washburn, Jacob D. Weldekidan, Teclemariam Xu, Wenwei de Leon, Natalia |
author_facet | Lima, Dayane Cristina Aviles, Alejandro Castro Alpers, Ryan Timothy Perkins, Alden Schoemaker, Dylan L Costa, Martin Michel, Kathryn J. Kaeppler, Shawn Ertl, David Romay, Maria Cinta Gage, Joseph L. Holland, James Beissinger, Timothy Bohn, Martin Buckler, Edward Edwards, Jode Flint-Garcia, Sherry Gore, Michael A. Hirsch, Candice N. Knoll, Joseph E. McKay, John Minyo, Richard Murray, Seth C. Schnable, James Sekhon, Rajandeep S. Singh, Maninder P. Sparks, Erin E. Thomison, Peter Thompson, Addie Tuinstra, Mitchell Wallace, Jason Washburn, Jacob D. Weldekidan, Teclemariam Xu, Wenwei de Leon, Natalia |
author_sort | Lima, Dayane Cristina |
collection | PubMed |
description | OBJECTIVES: This release note describes the Maize GxE project datasets within the Genomes to Fields (G2F) Initiative. The Maize GxE project aims to understand genotype by environment (GxE) interactions and use the information collected to improve resource allocation efficiency and increase genotype predictability and stability, particularly in scenarios of variable environmental patterns. Hybrids and inbreds are evaluated across multiple environments and phenotypic, genotypic, environmental, and metadata information are made publicly available. DATA DESCRIPTION: The datasets include phenotypic data of the hybrids and inbreds evaluated in 30 locations across the US and one location in Germany in 2020 and 2021, soil and climatic measurements and metadata information for all environments (combination of year and location), ReadMe, and description files for each data type. A set of common hybrids is present in each environment to connect with previous evaluations. Each environment had a collaborator responsible for collecting and submitting the data, the GxE coordination team combined all the collected information and removed obvious erroneous data. Collaborators received the combined data to use, verify and declare that the data generated in their own environments was accurate. Combined data is released to the public with minimal filtering to maintain fidelity to the original data. |
format | Online Article Text |
id | pubmed-10502993 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-105029932023-09-16 2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative Lima, Dayane Cristina Aviles, Alejandro Castro Alpers, Ryan Timothy Perkins, Alden Schoemaker, Dylan L Costa, Martin Michel, Kathryn J. Kaeppler, Shawn Ertl, David Romay, Maria Cinta Gage, Joseph L. Holland, James Beissinger, Timothy Bohn, Martin Buckler, Edward Edwards, Jode Flint-Garcia, Sherry Gore, Michael A. Hirsch, Candice N. Knoll, Joseph E. McKay, John Minyo, Richard Murray, Seth C. Schnable, James Sekhon, Rajandeep S. Singh, Maninder P. Sparks, Erin E. Thomison, Peter Thompson, Addie Tuinstra, Mitchell Wallace, Jason Washburn, Jacob D. Weldekidan, Teclemariam Xu, Wenwei de Leon, Natalia BMC Res Notes Data Note OBJECTIVES: This release note describes the Maize GxE project datasets within the Genomes to Fields (G2F) Initiative. The Maize GxE project aims to understand genotype by environment (GxE) interactions and use the information collected to improve resource allocation efficiency and increase genotype predictability and stability, particularly in scenarios of variable environmental patterns. Hybrids and inbreds are evaluated across multiple environments and phenotypic, genotypic, environmental, and metadata information are made publicly available. DATA DESCRIPTION: The datasets include phenotypic data of the hybrids and inbreds evaluated in 30 locations across the US and one location in Germany in 2020 and 2021, soil and climatic measurements and metadata information for all environments (combination of year and location), ReadMe, and description files for each data type. A set of common hybrids is present in each environment to connect with previous evaluations. Each environment had a collaborator responsible for collecting and submitting the data, the GxE coordination team combined all the collected information and removed obvious erroneous data. Collaborators received the combined data to use, verify and declare that the data generated in their own environments was accurate. Combined data is released to the public with minimal filtering to maintain fidelity to the original data. BioMed Central 2023-09-14 /pmc/articles/PMC10502993/ /pubmed/37710302 http://dx.doi.org/10.1186/s13104-023-06430-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Data Note Lima, Dayane Cristina Aviles, Alejandro Castro Alpers, Ryan Timothy Perkins, Alden Schoemaker, Dylan L Costa, Martin Michel, Kathryn J. Kaeppler, Shawn Ertl, David Romay, Maria Cinta Gage, Joseph L. Holland, James Beissinger, Timothy Bohn, Martin Buckler, Edward Edwards, Jode Flint-Garcia, Sherry Gore, Michael A. Hirsch, Candice N. Knoll, Joseph E. McKay, John Minyo, Richard Murray, Seth C. Schnable, James Sekhon, Rajandeep S. Singh, Maninder P. Sparks, Erin E. Thomison, Peter Thompson, Addie Tuinstra, Mitchell Wallace, Jason Washburn, Jacob D. Weldekidan, Teclemariam Xu, Wenwei de Leon, Natalia 2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative |
title | 2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative |
title_full | 2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative |
title_fullStr | 2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative |
title_full_unstemmed | 2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative |
title_short | 2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative |
title_sort | 2020-2021 field seasons of maize gxe project within the genomes to fields initiative |
topic | Data Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10502993/ https://www.ncbi.nlm.nih.gov/pubmed/37710302 http://dx.doi.org/10.1186/s13104-023-06430-y |
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