Cargando…
A study on metabolic characteristics and metabolic markers of gastrointestinal tumors
Tumor cells have significant heterogeneity in metabolism and are closely related to prognosis, gene mutation, and subtype. However, this association has not been demonstrated in reports of gastrointestinal tumors. In this study, we constructed four metabolic subtypes and identified four gene signatu...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10503448/ https://www.ncbi.nlm.nih.gov/pubmed/37705174 http://dx.doi.org/10.1080/15384047.2023.2255369 |
_version_ | 1785106525740597248 |
---|---|
author | Cong, Shan Bai, shanshan Zhang, Minghao Bi, yanfang Wang, yu Jin, shi He, hui |
author_facet | Cong, Shan Bai, shanshan Zhang, Minghao Bi, yanfang Wang, yu Jin, shi He, hui |
author_sort | Cong, Shan |
collection | PubMed |
description | Tumor cells have significant heterogeneity in metabolism and are closely related to prognosis, gene mutation, and subtype. However, this association has not been demonstrated in reports of gastrointestinal tumors. In this study, we constructed four metabolic subtypes and identified four gene signatures using the expression data and clinical information of 252 metabolism-related genes from TCGA and NCBI databases for gastric adenocarcinoma (STAD) and colorectal cancer (COAD and READ). MC1 had the worst prognosis compared to other classifications. GSig1 was mainly related to drug metabolism and was the highest in MC1 with the worst prognosis, while the other subtypes were mainly related to glucose metabolism pathways. This difference also existed in other different malignant tumors. In addition, metabolic typing was associated with chemotherapeutic drug response and tumor heterogeneity, which indicated that monitoring metabolic typing could contribute to drug efficacy and gene-targeted therapy. In conclusion, we identified differences among subtypes in clinical characteristics such as prognosis and revealed the potential function of metabolic subtype in response to chemotherapeutic agents and oncogene mutations. This work highlighted the potential clinical meaning of metabolic subtype and characteristics in drug therapy and prognosis assessment of malignant tumors. |
format | Online Article Text |
id | pubmed-10503448 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-105034482023-09-16 A study on metabolic characteristics and metabolic markers of gastrointestinal tumors Cong, Shan Bai, shanshan Zhang, Minghao Bi, yanfang Wang, yu Jin, shi He, hui Cancer Biol Ther Research Paper Tumor cells have significant heterogeneity in metabolism and are closely related to prognosis, gene mutation, and subtype. However, this association has not been demonstrated in reports of gastrointestinal tumors. In this study, we constructed four metabolic subtypes and identified four gene signatures using the expression data and clinical information of 252 metabolism-related genes from TCGA and NCBI databases for gastric adenocarcinoma (STAD) and colorectal cancer (COAD and READ). MC1 had the worst prognosis compared to other classifications. GSig1 was mainly related to drug metabolism and was the highest in MC1 with the worst prognosis, while the other subtypes were mainly related to glucose metabolism pathways. This difference also existed in other different malignant tumors. In addition, metabolic typing was associated with chemotherapeutic drug response and tumor heterogeneity, which indicated that monitoring metabolic typing could contribute to drug efficacy and gene-targeted therapy. In conclusion, we identified differences among subtypes in clinical characteristics such as prognosis and revealed the potential function of metabolic subtype in response to chemotherapeutic agents and oncogene mutations. This work highlighted the potential clinical meaning of metabolic subtype and characteristics in drug therapy and prognosis assessment of malignant tumors. Taylor & Francis 2023-09-13 /pmc/articles/PMC10503448/ /pubmed/37705174 http://dx.doi.org/10.1080/15384047.2023.2255369 Text en © 2023 The Author(s). Published with license by Taylor & Francis Group, LLC. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent. |
spellingShingle | Research Paper Cong, Shan Bai, shanshan Zhang, Minghao Bi, yanfang Wang, yu Jin, shi He, hui A study on metabolic characteristics and metabolic markers of gastrointestinal tumors |
title | A study on metabolic characteristics and metabolic markers of gastrointestinal tumors |
title_full | A study on metabolic characteristics and metabolic markers of gastrointestinal tumors |
title_fullStr | A study on metabolic characteristics and metabolic markers of gastrointestinal tumors |
title_full_unstemmed | A study on metabolic characteristics and metabolic markers of gastrointestinal tumors |
title_short | A study on metabolic characteristics and metabolic markers of gastrointestinal tumors |
title_sort | study on metabolic characteristics and metabolic markers of gastrointestinal tumors |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10503448/ https://www.ncbi.nlm.nih.gov/pubmed/37705174 http://dx.doi.org/10.1080/15384047.2023.2255369 |
work_keys_str_mv | AT congshan astudyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT baishanshan astudyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT zhangminghao astudyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT biyanfang astudyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT wangyu astudyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT jinshi astudyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT hehui astudyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT congshan studyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT baishanshan studyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT zhangminghao studyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT biyanfang studyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT wangyu studyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT jinshi studyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors AT hehui studyonmetaboliccharacteristicsandmetabolicmarkersofgastrointestinaltumors |