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Haplotype diversity of Heterodera koreana (Tylenchida: Heteroderidae), affecting bamboo in Korea

In a survey of plant-parasitic nematodes in agricultural fields, cyst-forming nematodes were found in soil planted bamboo in Korea. The aim of this study was to identify the cyst nematodes based on morphological and molecular characteristics. As the results, the morphology and morphometrics of cysts...

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Autores principales: Kang, Heonil, Ko, Hyoung-Rai, Lim, Yeon-Jeong, Park, Eun-Hyeong, Kim, Eun-Hwa, Park, Se-Keun, Park, Byeong-Yong, Han, Hyerim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Journal Experts 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10503861/
https://www.ncbi.nlm.nih.gov/pubmed/37720038
http://dx.doi.org/10.21203/rs.3.rs-3205194/v1
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author Kang, Heonil
Ko, Hyoung-Rai
Lim, Yeon-Jeong
Park, Eun-Hyeong
Kim, Eun-Hwa
Park, Se-Keun
Park, Byeong-Yong
Han, Hyerim
author_facet Kang, Heonil
Ko, Hyoung-Rai
Lim, Yeon-Jeong
Park, Eun-Hyeong
Kim, Eun-Hwa
Park, Se-Keun
Park, Byeong-Yong
Han, Hyerim
author_sort Kang, Heonil
collection PubMed
description In a survey of plant-parasitic nematodes in agricultural fields, cyst-forming nematodes were found in soil planted bamboo in Korea. The aim of this study was to identify the cyst nematodes based on morphological and molecular characteristics. As the results, the morphology and morphometrics of cysts and second-stage juveniles (J2s) were consistent with those of previous descriptions of Heterodera koreana. In phylogenetic analyses based on DNA sequences, these cyst nematodes were clustered together with clade of H. koreana in internal transcribed spacer (ITS) region, and large subunit D2-D3 segments (LSU D2-D3). These nematodes were clustered together with clade of H. koreana in cytochrome c oxidase subunit I (COI) gene, but a haplotype was different when compared with previous reported haplotypes (haplotype A-C) in Japan. This study showed these cyst nematodes were identified as H. koreana, and a new haplotype of H. koreana is distributed in Korea. We suggest that the new haplotype of H. koreana name as haplotype D.
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spelling pubmed-105038612023-09-16 Haplotype diversity of Heterodera koreana (Tylenchida: Heteroderidae), affecting bamboo in Korea Kang, Heonil Ko, Hyoung-Rai Lim, Yeon-Jeong Park, Eun-Hyeong Kim, Eun-Hwa Park, Se-Keun Park, Byeong-Yong Han, Hyerim Res Sq Article In a survey of plant-parasitic nematodes in agricultural fields, cyst-forming nematodes were found in soil planted bamboo in Korea. The aim of this study was to identify the cyst nematodes based on morphological and molecular characteristics. As the results, the morphology and morphometrics of cysts and second-stage juveniles (J2s) were consistent with those of previous descriptions of Heterodera koreana. In phylogenetic analyses based on DNA sequences, these cyst nematodes were clustered together with clade of H. koreana in internal transcribed spacer (ITS) region, and large subunit D2-D3 segments (LSU D2-D3). These nematodes were clustered together with clade of H. koreana in cytochrome c oxidase subunit I (COI) gene, but a haplotype was different when compared with previous reported haplotypes (haplotype A-C) in Japan. This study showed these cyst nematodes were identified as H. koreana, and a new haplotype of H. koreana is distributed in Korea. We suggest that the new haplotype of H. koreana name as haplotype D. American Journal Experts 2023-09-08 /pmc/articles/PMC10503861/ /pubmed/37720038 http://dx.doi.org/10.21203/rs.3.rs-3205194/v1 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use. https://creativecommons.org/licenses/by/4.0/License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License (https://creativecommons.org/licenses/by/4.0/)
spellingShingle Article
Kang, Heonil
Ko, Hyoung-Rai
Lim, Yeon-Jeong
Park, Eun-Hyeong
Kim, Eun-Hwa
Park, Se-Keun
Park, Byeong-Yong
Han, Hyerim
Haplotype diversity of Heterodera koreana (Tylenchida: Heteroderidae), affecting bamboo in Korea
title Haplotype diversity of Heterodera koreana (Tylenchida: Heteroderidae), affecting bamboo in Korea
title_full Haplotype diversity of Heterodera koreana (Tylenchida: Heteroderidae), affecting bamboo in Korea
title_fullStr Haplotype diversity of Heterodera koreana (Tylenchida: Heteroderidae), affecting bamboo in Korea
title_full_unstemmed Haplotype diversity of Heterodera koreana (Tylenchida: Heteroderidae), affecting bamboo in Korea
title_short Haplotype diversity of Heterodera koreana (Tylenchida: Heteroderidae), affecting bamboo in Korea
title_sort haplotype diversity of heterodera koreana (tylenchida: heteroderidae), affecting bamboo in korea
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10503861/
https://www.ncbi.nlm.nih.gov/pubmed/37720038
http://dx.doi.org/10.21203/rs.3.rs-3205194/v1
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