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Species-specific lipophilicities of fluorinated diketones in complex equilibria systems and their potential as multifaceted reversible covalent warheads

Combined molecular, physicochemical and chemical properties of electrophilic warheads can be applied to create covalent drugs with diverse facets. Here we study these properties in fluorinated diketones (FDKs) and their multicomponent equilibrium systems in the presence of protic nucleophiles, revea...

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Autores principales: Columbus, Ishay, Ghindes-Azaria, Lee, Herzog, Ido Michael, Blum, Eliav, Parvari, Galit, Eichen, Yoav, Cohen, Yoram, Gershonov, Eytan, Drug, Eyal, Saphier, Sigal, Elias, Shlomi, Smolkin, Boris, Zafrani, Yossi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10504258/
https://www.ncbi.nlm.nih.gov/pubmed/37715018
http://dx.doi.org/10.1038/s42004-023-01004-2
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author Columbus, Ishay
Ghindes-Azaria, Lee
Herzog, Ido Michael
Blum, Eliav
Parvari, Galit
Eichen, Yoav
Cohen, Yoram
Gershonov, Eytan
Drug, Eyal
Saphier, Sigal
Elias, Shlomi
Smolkin, Boris
Zafrani, Yossi
author_facet Columbus, Ishay
Ghindes-Azaria, Lee
Herzog, Ido Michael
Blum, Eliav
Parvari, Galit
Eichen, Yoav
Cohen, Yoram
Gershonov, Eytan
Drug, Eyal
Saphier, Sigal
Elias, Shlomi
Smolkin, Boris
Zafrani, Yossi
author_sort Columbus, Ishay
collection PubMed
description Combined molecular, physicochemical and chemical properties of electrophilic warheads can be applied to create covalent drugs with diverse facets. Here we study these properties in fluorinated diketones (FDKs) and their multicomponent equilibrium systems in the presence of protic nucleophiles, revealing the potential of the CF(2)(CO)(2) group to act as a multifaceted warhead for reversible covalent drugs. The equilibria compositions of various FDKs in water/octanol contain up to nine species. A simultaneous direct species-specific (19)F-NMR-based log P determination of these complex equilibria systems was achieved and revealed in some cases lipophilic to hydrophilic shifts, indicating possible adaptation to different environments. This was also demonstrated in (19)F-MAS-NMR-based water-membrane partitioning measurements. An interpretation of the results is suggested by the aid of a DFT study and (19)F-DOSY-NMR spectroscopy. In dilute solutions, a model FDK reacted with protected cysteine to form two hemi-thioketal regioisomers, indicating possible flexible regio-reactivity of CF(2)(CO)(2) warheads toward cysteine residues.
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spelling pubmed-105042582023-09-17 Species-specific lipophilicities of fluorinated diketones in complex equilibria systems and their potential as multifaceted reversible covalent warheads Columbus, Ishay Ghindes-Azaria, Lee Herzog, Ido Michael Blum, Eliav Parvari, Galit Eichen, Yoav Cohen, Yoram Gershonov, Eytan Drug, Eyal Saphier, Sigal Elias, Shlomi Smolkin, Boris Zafrani, Yossi Commun Chem Article Combined molecular, physicochemical and chemical properties of electrophilic warheads can be applied to create covalent drugs with diverse facets. Here we study these properties in fluorinated diketones (FDKs) and their multicomponent equilibrium systems in the presence of protic nucleophiles, revealing the potential of the CF(2)(CO)(2) group to act as a multifaceted warhead for reversible covalent drugs. The equilibria compositions of various FDKs in water/octanol contain up to nine species. A simultaneous direct species-specific (19)F-NMR-based log P determination of these complex equilibria systems was achieved and revealed in some cases lipophilic to hydrophilic shifts, indicating possible adaptation to different environments. This was also demonstrated in (19)F-MAS-NMR-based water-membrane partitioning measurements. An interpretation of the results is suggested by the aid of a DFT study and (19)F-DOSY-NMR spectroscopy. In dilute solutions, a model FDK reacted with protected cysteine to form two hemi-thioketal regioisomers, indicating possible flexible regio-reactivity of CF(2)(CO)(2) warheads toward cysteine residues. Nature Publishing Group UK 2023-09-15 /pmc/articles/PMC10504258/ /pubmed/37715018 http://dx.doi.org/10.1038/s42004-023-01004-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Columbus, Ishay
Ghindes-Azaria, Lee
Herzog, Ido Michael
Blum, Eliav
Parvari, Galit
Eichen, Yoav
Cohen, Yoram
Gershonov, Eytan
Drug, Eyal
Saphier, Sigal
Elias, Shlomi
Smolkin, Boris
Zafrani, Yossi
Species-specific lipophilicities of fluorinated diketones in complex equilibria systems and their potential as multifaceted reversible covalent warheads
title Species-specific lipophilicities of fluorinated diketones in complex equilibria systems and their potential as multifaceted reversible covalent warheads
title_full Species-specific lipophilicities of fluorinated diketones in complex equilibria systems and their potential as multifaceted reversible covalent warheads
title_fullStr Species-specific lipophilicities of fluorinated diketones in complex equilibria systems and their potential as multifaceted reversible covalent warheads
title_full_unstemmed Species-specific lipophilicities of fluorinated diketones in complex equilibria systems and their potential as multifaceted reversible covalent warheads
title_short Species-specific lipophilicities of fluorinated diketones in complex equilibria systems and their potential as multifaceted reversible covalent warheads
title_sort species-specific lipophilicities of fluorinated diketones in complex equilibria systems and their potential as multifaceted reversible covalent warheads
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10504258/
https://www.ncbi.nlm.nih.gov/pubmed/37715018
http://dx.doi.org/10.1038/s42004-023-01004-2
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