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Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function
Pneumothorax is a condition involving a collapsed lung, which requires accurate segmentation of computed tomography (CT) images for effective clinical decision-making. Numerous convolutional neural network-based methods for medical image segmentation have been proposed, but they often struggle to ba...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10504271/ https://www.ncbi.nlm.nih.gov/pubmed/37714871 http://dx.doi.org/10.1038/s41598-023-42388-4 |
_version_ | 1785106687100715008 |
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author | Liu, Yinghao Liang, Pengchen Liang, Kaiyi Chang, Qing |
author_facet | Liu, Yinghao Liang, Pengchen Liang, Kaiyi Chang, Qing |
author_sort | Liu, Yinghao |
collection | PubMed |
description | Pneumothorax is a condition involving a collapsed lung, which requires accurate segmentation of computed tomography (CT) images for effective clinical decision-making. Numerous convolutional neural network-based methods for medical image segmentation have been proposed, but they often struggle to balance model complexity with performance. To address this, we introduce the Efficient Feature Alignment Network (EFA-Net), a novel medical image segmentation network designed specifically for pneumothorax CT segmentation. EFA-Net uses EfficientNet as an encoder to extract features and a Feature Alignment (FA) module as a decoder to align features in both the spatial and channel dimensions. This design allows EFA-Net to achieve superior segmentation performance with reduced model complexity. In our dataset, our method outperforms various state-of-the-art methods in terms of accuracy and efficiency, achieving a Dice coefficient of 90.03%, an Intersection over Union (IOU) of 81.80%, and a sensitivity of 88.94%. Notably, EFA-Net has significantly lower FLOPs (1.549G) and parameters (0.432M), offering better robustness and facilitating easier deployment. Future work will explore the integration of downstream applications to enhance EFA-Net’s utility for clinicians and patients in real-world diagnostic scenarios. The source code of EFA-Net is available at: https://github.com/tianjiamutangchun/EFA-Net. |
format | Online Article Text |
id | pubmed-10504271 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-105042712023-09-17 Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function Liu, Yinghao Liang, Pengchen Liang, Kaiyi Chang, Qing Sci Rep Article Pneumothorax is a condition involving a collapsed lung, which requires accurate segmentation of computed tomography (CT) images for effective clinical decision-making. Numerous convolutional neural network-based methods for medical image segmentation have been proposed, but they often struggle to balance model complexity with performance. To address this, we introduce the Efficient Feature Alignment Network (EFA-Net), a novel medical image segmentation network designed specifically for pneumothorax CT segmentation. EFA-Net uses EfficientNet as an encoder to extract features and a Feature Alignment (FA) module as a decoder to align features in both the spatial and channel dimensions. This design allows EFA-Net to achieve superior segmentation performance with reduced model complexity. In our dataset, our method outperforms various state-of-the-art methods in terms of accuracy and efficiency, achieving a Dice coefficient of 90.03%, an Intersection over Union (IOU) of 81.80%, and a sensitivity of 88.94%. Notably, EFA-Net has significantly lower FLOPs (1.549G) and parameters (0.432M), offering better robustness and facilitating easier deployment. Future work will explore the integration of downstream applications to enhance EFA-Net’s utility for clinicians and patients in real-world diagnostic scenarios. The source code of EFA-Net is available at: https://github.com/tianjiamutangchun/EFA-Net. Nature Publishing Group UK 2023-09-15 /pmc/articles/PMC10504271/ /pubmed/37714871 http://dx.doi.org/10.1038/s41598-023-42388-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Liu, Yinghao Liang, Pengchen Liang, Kaiyi Chang, Qing Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function |
title | Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function |
title_full | Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function |
title_fullStr | Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function |
title_full_unstemmed | Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function |
title_short | Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function |
title_sort | automatic and efficient pneumothorax segmentation from ct images using efa-net with feature alignment function |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10504271/ https://www.ncbi.nlm.nih.gov/pubmed/37714871 http://dx.doi.org/10.1038/s41598-023-42388-4 |
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