Cargando…

Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function

Pneumothorax is a condition involving a collapsed lung, which requires accurate segmentation of computed tomography (CT) images for effective clinical decision-making. Numerous convolutional neural network-based methods for medical image segmentation have been proposed, but they often struggle to ba...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Yinghao, Liang, Pengchen, Liang, Kaiyi, Chang, Qing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10504271/
https://www.ncbi.nlm.nih.gov/pubmed/37714871
http://dx.doi.org/10.1038/s41598-023-42388-4
_version_ 1785106687100715008
author Liu, Yinghao
Liang, Pengchen
Liang, Kaiyi
Chang, Qing
author_facet Liu, Yinghao
Liang, Pengchen
Liang, Kaiyi
Chang, Qing
author_sort Liu, Yinghao
collection PubMed
description Pneumothorax is a condition involving a collapsed lung, which requires accurate segmentation of computed tomography (CT) images for effective clinical decision-making. Numerous convolutional neural network-based methods for medical image segmentation have been proposed, but they often struggle to balance model complexity with performance. To address this, we introduce the Efficient Feature Alignment Network (EFA-Net), a novel medical image segmentation network designed specifically for pneumothorax CT segmentation. EFA-Net uses EfficientNet as an encoder to extract features and a Feature Alignment (FA) module as a decoder to align features in both the spatial and channel dimensions. This design allows EFA-Net to achieve superior segmentation performance with reduced model complexity. In our dataset, our method outperforms various state-of-the-art methods in terms of accuracy and efficiency, achieving a Dice coefficient of 90.03%, an Intersection over Union (IOU) of 81.80%, and a sensitivity of 88.94%. Notably, EFA-Net has significantly lower FLOPs (1.549G) and parameters (0.432M), offering better robustness and facilitating easier deployment. Future work will explore the integration of downstream applications to enhance EFA-Net’s utility for clinicians and patients in real-world diagnostic scenarios. The source code of EFA-Net is available at: https://github.com/tianjiamutangchun/EFA-Net.
format Online
Article
Text
id pubmed-10504271
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-105042712023-09-17 Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function Liu, Yinghao Liang, Pengchen Liang, Kaiyi Chang, Qing Sci Rep Article Pneumothorax is a condition involving a collapsed lung, which requires accurate segmentation of computed tomography (CT) images for effective clinical decision-making. Numerous convolutional neural network-based methods for medical image segmentation have been proposed, but they often struggle to balance model complexity with performance. To address this, we introduce the Efficient Feature Alignment Network (EFA-Net), a novel medical image segmentation network designed specifically for pneumothorax CT segmentation. EFA-Net uses EfficientNet as an encoder to extract features and a Feature Alignment (FA) module as a decoder to align features in both the spatial and channel dimensions. This design allows EFA-Net to achieve superior segmentation performance with reduced model complexity. In our dataset, our method outperforms various state-of-the-art methods in terms of accuracy and efficiency, achieving a Dice coefficient of 90.03%, an Intersection over Union (IOU) of 81.80%, and a sensitivity of 88.94%. Notably, EFA-Net has significantly lower FLOPs (1.549G) and parameters (0.432M), offering better robustness and facilitating easier deployment. Future work will explore the integration of downstream applications to enhance EFA-Net’s utility for clinicians and patients in real-world diagnostic scenarios. The source code of EFA-Net is available at: https://github.com/tianjiamutangchun/EFA-Net. Nature Publishing Group UK 2023-09-15 /pmc/articles/PMC10504271/ /pubmed/37714871 http://dx.doi.org/10.1038/s41598-023-42388-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Liu, Yinghao
Liang, Pengchen
Liang, Kaiyi
Chang, Qing
Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function
title Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function
title_full Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function
title_fullStr Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function
title_full_unstemmed Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function
title_short Automatic and efficient pneumothorax segmentation from CT images using EFA-Net with feature alignment function
title_sort automatic and efficient pneumothorax segmentation from ct images using efa-net with feature alignment function
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10504271/
https://www.ncbi.nlm.nih.gov/pubmed/37714871
http://dx.doi.org/10.1038/s41598-023-42388-4
work_keys_str_mv AT liuyinghao automaticandefficientpneumothoraxsegmentationfromctimagesusingefanetwithfeaturealignmentfunction
AT liangpengchen automaticandefficientpneumothoraxsegmentationfromctimagesusingefanetwithfeaturealignmentfunction
AT liangkaiyi automaticandefficientpneumothoraxsegmentationfromctimagesusingefanetwithfeaturealignmentfunction
AT changqing automaticandefficientpneumothoraxsegmentationfromctimagesusingefanetwithfeaturealignmentfunction