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Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers
Cancer is regarded as one of the world's most serious health issues. Glucose regulated protein (GRP78) exhibits a vital role in the proliferation, invasion, and metastasis of numerous cancer cells. Based on that, this study screened the 390 natural compounds targeting the GRP78 catalytic site....
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Biomedical Informatics
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10504523/ https://www.ncbi.nlm.nih.gov/pubmed/37720293 http://dx.doi.org/10.6026/97320630019039 |
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author | Elaimi, Aisha Hanadi, M Baeissa Almutairi, Abdulrahman Alniwaider, Rashed Ahmed Abulkaliq, Munawir Alanazi Naga, Ahmed Shaker Kadhem, Juma Alkhenaizi Qamre, Alam |
author_facet | Elaimi, Aisha Hanadi, M Baeissa Almutairi, Abdulrahman Alniwaider, Rashed Ahmed Abulkaliq, Munawir Alanazi Naga, Ahmed Shaker Kadhem, Juma Alkhenaizi Qamre, Alam |
author_sort | Elaimi, Aisha |
collection | PubMed |
description | Cancer is regarded as one of the world's most serious health issues. Glucose regulated protein (GRP78) exhibits a vital role in the proliferation, invasion, and metastasis of numerous cancer cells. Based on that, this study screened the 390 natural compounds targeting the GRP78 catalytic site. Among them, corynanthin, toyocamycin, and nanaomycin were found to strongly bind with GRP78 and possess the binding affinities of -8.4, -8.9, and -8.7 kcal/mol, respectively. In addition, these compounds interacted with key residues of GRP78 and have several amino acid residues interaction in common with the cocrystal ligand (ATP). Based on physicochemical parameters and ADME evaluations, these compounds were found to have good drug-like properties. These compounds could be used as possible GRP78 inhibitors in the fight against cancers. Albeit, exhaustive experimental studies would be required to confirm the findings described here. |
format | Online Article Text |
id | pubmed-10504523 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Biomedical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-105045232023-09-17 Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers Elaimi, Aisha Hanadi, M Baeissa Almutairi, Abdulrahman Alniwaider, Rashed Ahmed Abulkaliq, Munawir Alanazi Naga, Ahmed Shaker Kadhem, Juma Alkhenaizi Qamre, Alam Bioinformation Research Article Cancer is regarded as one of the world's most serious health issues. Glucose regulated protein (GRP78) exhibits a vital role in the proliferation, invasion, and metastasis of numerous cancer cells. Based on that, this study screened the 390 natural compounds targeting the GRP78 catalytic site. Among them, corynanthin, toyocamycin, and nanaomycin were found to strongly bind with GRP78 and possess the binding affinities of -8.4, -8.9, and -8.7 kcal/mol, respectively. In addition, these compounds interacted with key residues of GRP78 and have several amino acid residues interaction in common with the cocrystal ligand (ATP). Based on physicochemical parameters and ADME evaluations, these compounds were found to have good drug-like properties. These compounds could be used as possible GRP78 inhibitors in the fight against cancers. Albeit, exhaustive experimental studies would be required to confirm the findings described here. Biomedical Informatics 2023-01-31 /pmc/articles/PMC10504523/ /pubmed/37720293 http://dx.doi.org/10.6026/97320630019039 Text en © 2023 Biomedical Informatics https://creativecommons.org/licenses/by/3.0/This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License. |
spellingShingle | Research Article Elaimi, Aisha Hanadi, M Baeissa Almutairi, Abdulrahman Alniwaider, Rashed Ahmed Abulkaliq, Munawir Alanazi Naga, Ahmed Shaker Kadhem, Juma Alkhenaizi Qamre, Alam Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers |
title | Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers |
title_full | Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers |
title_fullStr | Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers |
title_full_unstemmed | Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers |
title_short | Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers |
title_sort | insights from the molecular docking analysis of grp78 with natural compound inhibitors in the management of cancers |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10504523/ https://www.ncbi.nlm.nih.gov/pubmed/37720293 http://dx.doi.org/10.6026/97320630019039 |
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