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Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers

Cancer is regarded as one of the world's most serious health issues. Glucose regulated protein (GRP78) exhibits a vital role in the proliferation, invasion, and metastasis of numerous cancer cells. Based on that, this study screened the 390 natural compounds targeting the GRP78 catalytic site....

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Autores principales: Elaimi, Aisha, Hanadi, M Baeissa, Almutairi, Abdulrahman, Alniwaider, Rashed Ahmed, Abulkaliq, Munawir Alanazi, Naga, Ahmed Shaker, Kadhem, Juma Alkhenaizi, Qamre, Alam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10504523/
https://www.ncbi.nlm.nih.gov/pubmed/37720293
http://dx.doi.org/10.6026/97320630019039
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author Elaimi, Aisha
Hanadi, M Baeissa
Almutairi, Abdulrahman
Alniwaider, Rashed Ahmed
Abulkaliq, Munawir Alanazi
Naga, Ahmed Shaker
Kadhem, Juma Alkhenaizi
Qamre, Alam
author_facet Elaimi, Aisha
Hanadi, M Baeissa
Almutairi, Abdulrahman
Alniwaider, Rashed Ahmed
Abulkaliq, Munawir Alanazi
Naga, Ahmed Shaker
Kadhem, Juma Alkhenaizi
Qamre, Alam
author_sort Elaimi, Aisha
collection PubMed
description Cancer is regarded as one of the world's most serious health issues. Glucose regulated protein (GRP78) exhibits a vital role in the proliferation, invasion, and metastasis of numerous cancer cells. Based on that, this study screened the 390 natural compounds targeting the GRP78 catalytic site. Among them, corynanthin, toyocamycin, and nanaomycin were found to strongly bind with GRP78 and possess the binding affinities of -8.4, -8.9, and -8.7 kcal/mol, respectively. In addition, these compounds interacted with key residues of GRP78 and have several amino acid residues interaction in common with the cocrystal ligand (ATP). Based on physicochemical parameters and ADME evaluations, these compounds were found to have good drug-like properties. These compounds could be used as possible GRP78 inhibitors in the fight against cancers. Albeit, exhaustive experimental studies would be required to confirm the findings described here.
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spelling pubmed-105045232023-09-17 Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers Elaimi, Aisha Hanadi, M Baeissa Almutairi, Abdulrahman Alniwaider, Rashed Ahmed Abulkaliq, Munawir Alanazi Naga, Ahmed Shaker Kadhem, Juma Alkhenaizi Qamre, Alam Bioinformation Research Article Cancer is regarded as one of the world's most serious health issues. Glucose regulated protein (GRP78) exhibits a vital role in the proliferation, invasion, and metastasis of numerous cancer cells. Based on that, this study screened the 390 natural compounds targeting the GRP78 catalytic site. Among them, corynanthin, toyocamycin, and nanaomycin were found to strongly bind with GRP78 and possess the binding affinities of -8.4, -8.9, and -8.7 kcal/mol, respectively. In addition, these compounds interacted with key residues of GRP78 and have several amino acid residues interaction in common with the cocrystal ligand (ATP). Based on physicochemical parameters and ADME evaluations, these compounds were found to have good drug-like properties. These compounds could be used as possible GRP78 inhibitors in the fight against cancers. Albeit, exhaustive experimental studies would be required to confirm the findings described here. Biomedical Informatics 2023-01-31 /pmc/articles/PMC10504523/ /pubmed/37720293 http://dx.doi.org/10.6026/97320630019039 Text en © 2023 Biomedical Informatics https://creativecommons.org/licenses/by/3.0/This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License.
spellingShingle Research Article
Elaimi, Aisha
Hanadi, M Baeissa
Almutairi, Abdulrahman
Alniwaider, Rashed Ahmed
Abulkaliq, Munawir Alanazi
Naga, Ahmed Shaker
Kadhem, Juma Alkhenaizi
Qamre, Alam
Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers
title Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers
title_full Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers
title_fullStr Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers
title_full_unstemmed Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers
title_short Insights from the molecular docking analysis of GRP78 with natural compound inhibitors in the management of cancers
title_sort insights from the molecular docking analysis of grp78 with natural compound inhibitors in the management of cancers
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10504523/
https://www.ncbi.nlm.nih.gov/pubmed/37720293
http://dx.doi.org/10.6026/97320630019039
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