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Retrospective quantification of clinical abdominal DCE-MRI using pharmacokinetics-informed deep learning: a proof-of-concept study
INTRODUCTION: Dynamic contrast-enhanced (DCE) MRI has important clinical value for early detection, accurate staging, and therapeutic monitoring of cancers. However, conventional multi-phasic abdominal DCE-MRI has limited temporal resolution and provides qualitative or semi-quantitative assessments...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10507354/ https://www.ncbi.nlm.nih.gov/pubmed/37731600 http://dx.doi.org/10.3389/fradi.2023.1168901 |
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author | Wu, Chaowei Wang, Nan Gaddam, Srinivas Wang, Lixia Han, Hui Sung, Kyunghyun Christodoulou, Anthony G. Xie, Yibin Pandol, Stephen Li, Debiao |
author_facet | Wu, Chaowei Wang, Nan Gaddam, Srinivas Wang, Lixia Han, Hui Sung, Kyunghyun Christodoulou, Anthony G. Xie, Yibin Pandol, Stephen Li, Debiao |
author_sort | Wu, Chaowei |
collection | PubMed |
description | INTRODUCTION: Dynamic contrast-enhanced (DCE) MRI has important clinical value for early detection, accurate staging, and therapeutic monitoring of cancers. However, conventional multi-phasic abdominal DCE-MRI has limited temporal resolution and provides qualitative or semi-quantitative assessments of tissue vascularity. In this study, the feasibility of retrospectively quantifying multi-phasic abdominal DCE-MRI by using pharmacokinetics-informed deep learning to improve temporal resolution was investigated. METHOD: Forty-five subjects consisting of healthy controls, pancreatic ductal adenocarcinoma (PDAC), and chronic pancreatitis (CP) were imaged with a 2-s temporal-resolution quantitative DCE sequence, from which 30-s temporal-resolution multi-phasic DCE-MRI was synthesized based on clinical protocol. A pharmacokinetics-informed neural network was trained to improve the temporal resolution of the multi-phasic DCE before the quantification of pharmacokinetic parameters. Through ten-fold cross-validation, the agreement between pharmacokinetic parameters estimated from synthesized multi-phasic DCE after deep learning inference was assessed against reference parameters from the corresponding quantitative DCE-MRI images. The ability of the deep learning estimated parameters to differentiate abnormal from normal tissues was assessed as well. RESULTS: The pharmacokinetic parameters estimated after deep learning have a high level of agreement with the reference values. In the cross-validation, all three pharmacokinetic parameters (transfer constant [Formula: see text] , fractional extravascular extracellular volume [Formula: see text] , and rate constant [Formula: see text]) achieved intraclass correlation coefficient and R(2) between 0.84–0.94, and low coefficients of variation (10.1%, 12.3%, and 5.6%, respectively) relative to the reference values. Significant differences were found between healthy pancreas, PDAC tumor and non-tumor, and CP pancreas. DISCUSSION: Retrospective quantification (RoQ) of clinical multi-phasic DCE-MRI is possible by deep learning. This technique has the potential to derive quantitative pharmacokinetic parameters from clinical multi-phasic DCE data for a more objective and precise assessment of cancer. |
format | Online Article Text |
id | pubmed-10507354 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-105073542023-09-20 Retrospective quantification of clinical abdominal DCE-MRI using pharmacokinetics-informed deep learning: a proof-of-concept study Wu, Chaowei Wang, Nan Gaddam, Srinivas Wang, Lixia Han, Hui Sung, Kyunghyun Christodoulou, Anthony G. Xie, Yibin Pandol, Stephen Li, Debiao Front Radiol Radiology INTRODUCTION: Dynamic contrast-enhanced (DCE) MRI has important clinical value for early detection, accurate staging, and therapeutic monitoring of cancers. However, conventional multi-phasic abdominal DCE-MRI has limited temporal resolution and provides qualitative or semi-quantitative assessments of tissue vascularity. In this study, the feasibility of retrospectively quantifying multi-phasic abdominal DCE-MRI by using pharmacokinetics-informed deep learning to improve temporal resolution was investigated. METHOD: Forty-five subjects consisting of healthy controls, pancreatic ductal adenocarcinoma (PDAC), and chronic pancreatitis (CP) were imaged with a 2-s temporal-resolution quantitative DCE sequence, from which 30-s temporal-resolution multi-phasic DCE-MRI was synthesized based on clinical protocol. A pharmacokinetics-informed neural network was trained to improve the temporal resolution of the multi-phasic DCE before the quantification of pharmacokinetic parameters. Through ten-fold cross-validation, the agreement between pharmacokinetic parameters estimated from synthesized multi-phasic DCE after deep learning inference was assessed against reference parameters from the corresponding quantitative DCE-MRI images. The ability of the deep learning estimated parameters to differentiate abnormal from normal tissues was assessed as well. RESULTS: The pharmacokinetic parameters estimated after deep learning have a high level of agreement with the reference values. In the cross-validation, all three pharmacokinetic parameters (transfer constant [Formula: see text] , fractional extravascular extracellular volume [Formula: see text] , and rate constant [Formula: see text]) achieved intraclass correlation coefficient and R(2) between 0.84–0.94, and low coefficients of variation (10.1%, 12.3%, and 5.6%, respectively) relative to the reference values. Significant differences were found between healthy pancreas, PDAC tumor and non-tumor, and CP pancreas. DISCUSSION: Retrospective quantification (RoQ) of clinical multi-phasic DCE-MRI is possible by deep learning. This technique has the potential to derive quantitative pharmacokinetic parameters from clinical multi-phasic DCE data for a more objective and precise assessment of cancer. Frontiers Media S.A. 2023-09-04 /pmc/articles/PMC10507354/ /pubmed/37731600 http://dx.doi.org/10.3389/fradi.2023.1168901 Text en © 2023 Wu, Wang, Gaddam, Wang, Han, Sung, Christodoulou, Xie, Pandol and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY) (https://creativecommons.org/licenses/by/4.0/) . The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Radiology Wu, Chaowei Wang, Nan Gaddam, Srinivas Wang, Lixia Han, Hui Sung, Kyunghyun Christodoulou, Anthony G. Xie, Yibin Pandol, Stephen Li, Debiao Retrospective quantification of clinical abdominal DCE-MRI using pharmacokinetics-informed deep learning: a proof-of-concept study |
title | Retrospective quantification of clinical abdominal DCE-MRI using pharmacokinetics-informed deep learning: a proof-of-concept study |
title_full | Retrospective quantification of clinical abdominal DCE-MRI using pharmacokinetics-informed deep learning: a proof-of-concept study |
title_fullStr | Retrospective quantification of clinical abdominal DCE-MRI using pharmacokinetics-informed deep learning: a proof-of-concept study |
title_full_unstemmed | Retrospective quantification of clinical abdominal DCE-MRI using pharmacokinetics-informed deep learning: a proof-of-concept study |
title_short | Retrospective quantification of clinical abdominal DCE-MRI using pharmacokinetics-informed deep learning: a proof-of-concept study |
title_sort | retrospective quantification of clinical abdominal dce-mri using pharmacokinetics-informed deep learning: a proof-of-concept study |
topic | Radiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10507354/ https://www.ncbi.nlm.nih.gov/pubmed/37731600 http://dx.doi.org/10.3389/fradi.2023.1168901 |
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