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Human deleterious mutation rate implies high fitness variance, with declining mean fitness compensated by rarer beneficial mutations of larger effect

Each new human has an expected U(d) = 2 – 10 new deleterious mutations. This deluge of deleterious mutations cannot all be purged, and therefore accumulate in a declining fitness ratchet. Using a novel simulation framework designed to efficiently handle genome-wide linkage disequilibria across many...

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Autores principales: Matheson, Joseph, Bertram, Jason, Masel, Joanna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10508744/
https://www.ncbi.nlm.nih.gov/pubmed/37732183
http://dx.doi.org/10.1101/2023.09.01.555871
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author Matheson, Joseph
Bertram, Jason
Masel, Joanna
author_facet Matheson, Joseph
Bertram, Jason
Masel, Joanna
author_sort Matheson, Joseph
collection PubMed
description Each new human has an expected U(d) = 2 – 10 new deleterious mutations. This deluge of deleterious mutations cannot all be purged, and therefore accumulate in a declining fitness ratchet. Using a novel simulation framework designed to efficiently handle genome-wide linkage disequilibria across many segregating sites, we find that rarer, beneficial mutations of larger effect are sufficient to compensate fitness declines due to the fixation of many slightly deleterious mutations. Drift barrier theory posits a similar asymmetric pattern of fixations to explain ratcheting genome size and complexity, but in our theory, the cause is U(d) > 1 rather than small population size. In our simulations, U(d) ~2 – 10 generates high within-population variance in relative fitness; two individuals will typically differ in fitness by 15–40%. U(d) ~2 – 10 also slows net adaptation by ~13%−39%. Surprisingly, fixation rates are more sensitive to changes in the beneficial than the deleterious mutation rate, e.g. a 10% increase in overall mutation rate leads to faster adaptation; this puts to rest dysgenic fears about increasing mutation rates due to rising paternal age.
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spelling pubmed-105087442023-09-20 Human deleterious mutation rate implies high fitness variance, with declining mean fitness compensated by rarer beneficial mutations of larger effect Matheson, Joseph Bertram, Jason Masel, Joanna bioRxiv Article Each new human has an expected U(d) = 2 – 10 new deleterious mutations. This deluge of deleterious mutations cannot all be purged, and therefore accumulate in a declining fitness ratchet. Using a novel simulation framework designed to efficiently handle genome-wide linkage disequilibria across many segregating sites, we find that rarer, beneficial mutations of larger effect are sufficient to compensate fitness declines due to the fixation of many slightly deleterious mutations. Drift barrier theory posits a similar asymmetric pattern of fixations to explain ratcheting genome size and complexity, but in our theory, the cause is U(d) > 1 rather than small population size. In our simulations, U(d) ~2 – 10 generates high within-population variance in relative fitness; two individuals will typically differ in fitness by 15–40%. U(d) ~2 – 10 also slows net adaptation by ~13%−39%. Surprisingly, fixation rates are more sensitive to changes in the beneficial than the deleterious mutation rate, e.g. a 10% increase in overall mutation rate leads to faster adaptation; this puts to rest dysgenic fears about increasing mutation rates due to rising paternal age. Cold Spring Harbor Laboratory 2023-09-04 /pmc/articles/PMC10508744/ /pubmed/37732183 http://dx.doi.org/10.1101/2023.09.01.555871 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Matheson, Joseph
Bertram, Jason
Masel, Joanna
Human deleterious mutation rate implies high fitness variance, with declining mean fitness compensated by rarer beneficial mutations of larger effect
title Human deleterious mutation rate implies high fitness variance, with declining mean fitness compensated by rarer beneficial mutations of larger effect
title_full Human deleterious mutation rate implies high fitness variance, with declining mean fitness compensated by rarer beneficial mutations of larger effect
title_fullStr Human deleterious mutation rate implies high fitness variance, with declining mean fitness compensated by rarer beneficial mutations of larger effect
title_full_unstemmed Human deleterious mutation rate implies high fitness variance, with declining mean fitness compensated by rarer beneficial mutations of larger effect
title_short Human deleterious mutation rate implies high fitness variance, with declining mean fitness compensated by rarer beneficial mutations of larger effect
title_sort human deleterious mutation rate implies high fitness variance, with declining mean fitness compensated by rarer beneficial mutations of larger effect
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10508744/
https://www.ncbi.nlm.nih.gov/pubmed/37732183
http://dx.doi.org/10.1101/2023.09.01.555871
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