Cargando…

Repetitive DNA sequence detection and its role in the human genome

Repetitive DNA sequences playing critical roles in driving evolution, inducing variation, and regulating gene expression. In this review, we summarized the definition, arrangement, and structural characteristics of repeats. Besides, we introduced diverse biological functions of repeats and reviewed...

Descripción completa

Detalles Bibliográficos
Autores principales:	Liao, Xingyu, Zhu, Wufei, Zhou, Juexiao, Li, Haoyang, Xu, Xiaopeng, Zhang, Bin, Gao, Xin
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2023
Materias:	Review Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10509279/ https://www.ncbi.nlm.nih.gov/pubmed/37726397 http://dx.doi.org/10.1038/s42003-023-05322-y

Ejemplares similares

A unified method to revoke the private data of patients in intelligent healthcare with audit to forget
por: Zhou, Juexiao, et al.
Publicado: (2023)

LCAT: an isoform-sensitive error correction for transcriptome sequencing long reads
por: Zhu, Wufei, et al.
Publicado: (2023)

A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics
por: Li, Haoyang, et al.
Publicado: (2023)

SD(2): spatially resolved transcriptomics deconvolution through integration of dropout and spatial information
por: Li, Haoyang, et al.
Publicado: (2022)

Annotating TSSs in Multiple Cell Types Based on DNA Sequence and RNA-seq Data via DeeReCT-TSS
por: Zhou, Juexiao, et al.
Publicado: (2022)

CaMeRe: A Novel Tool for Inference of Cancer Metabolic Reprogramming
por: Li, Haoyang, et al.
Publicado: (2020)

msRepDB: a comprehensive repetitive sequence database of over 80 000 species
por: Liao, Xingyu, et al.
Publicado: (2021)

Applications of deep learning in understanding gene regulation
por: Li, Zhongxiao, et al.
Publicado: (2023)

Sequencing of long stretches of repetitive DNA
por: De Bustos, Alfredo, et al.
Publicado: (2016)

Special Issue: Repetitive DNA Sequences
por: Lower, Sarah E., et al.
Publicado: (2019)

ReRep: Computational detection of repetitive sequences in genome survey sequences (GSS)
por: Otto, Thomas D, et al.
Publicado: (2008)

An Interpretable Computer-Aided Diagnosis Method for Periodontitis From Panoramic Radiographs
por: Li, Haoyang, et al.
Publicado: (2021)

The Role of Repetitive Sequences in Repatterning of Major Ribosomal DNA Clusters in Lepidoptera
por: Dalíková, Martina, et al.
Publicado: (2023)

exo-FISH: Protocol for detecting DNA breaks in repetitive regions of mammalian genomes
por: Saayman, Xanita, et al.
Publicado: (2023)

The Evolutionary Dynamics of Repetitive DNA and Its Impact on the Genome Diversification in the Genus Sorghum
por: Kuo, Yi-Tzu, et al.
Publicado: (2021)

Prediction of genome-wide DNA methylation in repetitive elements
por: Zheng, Yinan, et al.
Publicado: (2017)

Automatic identification of species-specific repetitive DNA sequences and their utilization for detecting microbial organisms
por: Koressaar, Triinu, et al.
Publicado: (2009)

Extensive genomic rearrangements mediated by repetitive sequences in plastomes of Medicago and its relatives
por: Wu, Shuang, et al.
Publicado: (2021)

Nonconsensus Protein Binding to Repetitive DNA Sequence Elements Significantly Affects Eukaryotic Genomes
por: Afek, Ariel, et al.
Publicado: (2015)

Characterization of Repetitive DNA in Saccharum officinarum and Saccharum spontaneum by Genome Sequencing and Cytological Assays
por: Wang, Kai, et al.
Publicado: (2022)

Genome size and identification of abundant repetitive sequences in Vallisneria spinulosa
por: Feng, RuiJuan, et al.
Publicado: (2017)

Intranuclear Anchoring of Repetitive DNA Sequences: Centromeres, Telomeres, and Ribosomal DNA
por: Weipoltshammer, Klara, et al.
Publicado: (1999)

Monopolin recruits condensin to organize centromere DNA and repetitive DNA sequences
por: Burrack, Laura S., et al.
Publicado: (2013)

Cloning and physical localization of male-biased repetitive DNA sequences in Spinacia oleracea (Amaranthaceae)
por: Zhou, Jian, et al.
Publicado: (2021)

The repetitive DNA landscape in Avena (Poaceae): chromosome and genome evolution defined by major repeat classes in whole-genome sequence reads
por: Liu, Qing, et al.
Publicado: (2019)

Directed PCR-free engineering of highly repetitive DNA sequences
por: Scior, Annika, et al.
Publicado: (2011)

CGGBP1 mitigates cytosine methylation at repetitive DNA sequences
por: Agarwal, Prasoon, et al.
Publicado: (2015)

Isolation and characterization of centromeric repetitive DNA sequences in Saccharum spontaneum
por: Zhang, Wenpan, et al.
Publicado: (2017)

Repetitive DNA Sequences in the Human Y Chromosome and Male Infertility
por: Xu, Yong, et al.
Publicado: (2022)

DNA methylation status of interspersed repetitive sequences in patients with migraine
por: Kraveishvili, Nino, et al.
Publicado: (2023)

Bacterial repetitive extragenic palindromic sequences are DNA targets for Insertion Sequence elements
por: Tobes, Raquel, et al.
Publicado: (2006)

Genome size and identification of repetitive DNA sequences using low coverage sequencing in Hancornia speciosa Gomes (Apocynaceae: Gentianales)
por: Santos, Vanessa, et al.
Publicado: (2020)

Aberrant reduction of telomere repetitive sequences in plasma cell-free DNA for early breast cancer detection
por: Wu, Xi, et al.
Publicado: (2015)

Silencing repetitive DNA
por: Iglesias, Nahid, et al.
Publicado: (2017)

Repetitive sequences in aging
por: Arancio, Walter, et al.
Publicado: (2021)

Analysis of repetitive DNA distribution patterns in the Tribolium castaneum genome
por: Wang, Suzhi, et al.
Publicado: (2008)

Impact of Repetitive DNA Elements on Snake Genome Biology and Evolution
por: Ahmad, Syed Farhan, et al.
Publicado: (2021)

Repetitive Sequences in Plant Nuclear DNA: Types, Distribution, Evolution and Function
por: Mehrotra, Shweta, et al.
Publicado: (2014)

Genomic Organization of Repetitive DNA Elements and Its Implications for the Chromosomal Evolution of Channid Fishes (Actinopterygii, Perciformes)
por: Cioffi, Marcelo de Bello, et al.
Publicado: (2015)

A Novel Constraint for Thermodynamically Designing DNA Sequences
por: Zhang, Qiang, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_0pg3lam7osomcaa41k6j6os84n