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The spectral underpinnings of pathogen spread on animal networks
Predicting what factors promote or protect populations from infectious disease is a fundamental epidemiological challenge. Social networks, where nodes represent hosts and edges represent direct or indirect contacts between them, are important in quantifying these aspects of infectious disease dynam...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10509581/ https://www.ncbi.nlm.nih.gov/pubmed/37727089 http://dx.doi.org/10.1098/rspb.2023.0951 |
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author | Fountain-Jones, Nicholas M. Silk, Mathew Appaw, Raima Carol Hamede, Rodrigo Rushmore, Julie VanderWaal, Kimberly Craft, Meggan E. Carver, Scott Charleston, Michael |
author_facet | Fountain-Jones, Nicholas M. Silk, Mathew Appaw, Raima Carol Hamede, Rodrigo Rushmore, Julie VanderWaal, Kimberly Craft, Meggan E. Carver, Scott Charleston, Michael |
author_sort | Fountain-Jones, Nicholas M. |
collection | PubMed |
description | Predicting what factors promote or protect populations from infectious disease is a fundamental epidemiological challenge. Social networks, where nodes represent hosts and edges represent direct or indirect contacts between them, are important in quantifying these aspects of infectious disease dynamics. However, how network structure and epidemic parameters interact in empirical networks to promote or protect animal populations from infectious disease remains a challenge. Here we draw on advances in spectral graph theory and machine learning to build predictive models of pathogen spread on a large collection of empirical networks from across the animal kingdom. We show that the spectral features of an animal network are powerful predictors of pathogen spread for a variety of hosts and pathogens and can be a valuable proxy for the vulnerability of animal networks to pathogen spread. We validate our findings using interpretable machine learning techniques and provide a flexible web application for animal health practitioners to assess the vulnerability of a particular network to pathogen spread. |
format | Online Article Text |
id | pubmed-10509581 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-105095812023-09-21 The spectral underpinnings of pathogen spread on animal networks Fountain-Jones, Nicholas M. Silk, Mathew Appaw, Raima Carol Hamede, Rodrigo Rushmore, Julie VanderWaal, Kimberly Craft, Meggan E. Carver, Scott Charleston, Michael Proc Biol Sci Ecology Predicting what factors promote or protect populations from infectious disease is a fundamental epidemiological challenge. Social networks, where nodes represent hosts and edges represent direct or indirect contacts between them, are important in quantifying these aspects of infectious disease dynamics. However, how network structure and epidemic parameters interact in empirical networks to promote or protect animal populations from infectious disease remains a challenge. Here we draw on advances in spectral graph theory and machine learning to build predictive models of pathogen spread on a large collection of empirical networks from across the animal kingdom. We show that the spectral features of an animal network are powerful predictors of pathogen spread for a variety of hosts and pathogens and can be a valuable proxy for the vulnerability of animal networks to pathogen spread. We validate our findings using interpretable machine learning techniques and provide a flexible web application for animal health practitioners to assess the vulnerability of a particular network to pathogen spread. The Royal Society 2023-09-20 /pmc/articles/PMC10509581/ /pubmed/37727089 http://dx.doi.org/10.1098/rspb.2023.0951 Text en © 2023 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Ecology Fountain-Jones, Nicholas M. Silk, Mathew Appaw, Raima Carol Hamede, Rodrigo Rushmore, Julie VanderWaal, Kimberly Craft, Meggan E. Carver, Scott Charleston, Michael The spectral underpinnings of pathogen spread on animal networks |
title | The spectral underpinnings of pathogen spread on animal networks |
title_full | The spectral underpinnings of pathogen spread on animal networks |
title_fullStr | The spectral underpinnings of pathogen spread on animal networks |
title_full_unstemmed | The spectral underpinnings of pathogen spread on animal networks |
title_short | The spectral underpinnings of pathogen spread on animal networks |
title_sort | spectral underpinnings of pathogen spread on animal networks |
topic | Ecology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10509581/ https://www.ncbi.nlm.nih.gov/pubmed/37727089 http://dx.doi.org/10.1098/rspb.2023.0951 |
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