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Identification and validation of a prognostic risk-scoring model based on the level of TIM-3 expression in acute myeloid leukemia

Acute myeloid leukemia (AML) is characterized by an unfavorable prognosis due to the presence of self-renewing leukemic stem cells (LSCs). The presence of T-cell immunoglobulin mucin-3 (TIM-3) on the surface of LSCs has been observed in various types of human AML, exerting an impact on the prognosti...

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Autores principales: Huang, Wanxue, Zheng, Shasha, Wang, Qi, Zhao, Na, Long, Zhiguo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10511414/
https://www.ncbi.nlm.nih.gov/pubmed/37730831
http://dx.doi.org/10.1038/s41598-023-42700-2
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author Huang, Wanxue
Zheng, Shasha
Wang, Qi
Zhao, Na
Long, Zhiguo
author_facet Huang, Wanxue
Zheng, Shasha
Wang, Qi
Zhao, Na
Long, Zhiguo
author_sort Huang, Wanxue
collection PubMed
description Acute myeloid leukemia (AML) is characterized by an unfavorable prognosis due to the presence of self-renewing leukemic stem cells (LSCs). The presence of T-cell immunoglobulin mucin-3 (TIM-3) on the surface of LSCs has been observed in various types of human AML, exerting an impact on the prognostic outcome. Exploring the hub genes associated with varying levels of TIM-3 expression offers a valuable approach to enhance our understanding of the underlying mechanisms involving TIM-3 and to identify potential prognostic indicators in AML. Nevertheless, to date, no research studies have reported a prognostic model that relies on the level of TIM-3 expression. In our study, we screen the hub-genes based on different expression level of TIM-3 through WGCNA. The prognostic risk-scoring model was constructed based on hub-genes. The results show the risk prognostic model has extraordinary ability to predict prognosis in both the training and validation sets. The high-risk group present poor prognosis with mutation of NPM1, TP53 (Multiple Hit) and FLT3(multiple hit), while IDH2 (Missense Mutation), MUC16 (Multiple Hit/Missense Mutation) occur mutation in low-risk group presenting favorite prognosis than high-risk group. Leukocyte cell–cell adhesion, regulation of T cell activation and I-κB kinase/NF-κB signaling enriched in high-risk group, involving in HSCs or LSCs anchoring to BM, which implicated in LSCs survival and chemotherapy resistance. B7-H3 (CD276) and CD276 would be the potential immune targets in high-risk group. The risk score model may help in distinguishing immune and molecular characteristics, predicting patient outcomes.
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spelling pubmed-105114142023-09-22 Identification and validation of a prognostic risk-scoring model based on the level of TIM-3 expression in acute myeloid leukemia Huang, Wanxue Zheng, Shasha Wang, Qi Zhao, Na Long, Zhiguo Sci Rep Article Acute myeloid leukemia (AML) is characterized by an unfavorable prognosis due to the presence of self-renewing leukemic stem cells (LSCs). The presence of T-cell immunoglobulin mucin-3 (TIM-3) on the surface of LSCs has been observed in various types of human AML, exerting an impact on the prognostic outcome. Exploring the hub genes associated with varying levels of TIM-3 expression offers a valuable approach to enhance our understanding of the underlying mechanisms involving TIM-3 and to identify potential prognostic indicators in AML. Nevertheless, to date, no research studies have reported a prognostic model that relies on the level of TIM-3 expression. In our study, we screen the hub-genes based on different expression level of TIM-3 through WGCNA. The prognostic risk-scoring model was constructed based on hub-genes. The results show the risk prognostic model has extraordinary ability to predict prognosis in both the training and validation sets. The high-risk group present poor prognosis with mutation of NPM1, TP53 (Multiple Hit) and FLT3(multiple hit), while IDH2 (Missense Mutation), MUC16 (Multiple Hit/Missense Mutation) occur mutation in low-risk group presenting favorite prognosis than high-risk group. Leukocyte cell–cell adhesion, regulation of T cell activation and I-κB kinase/NF-κB signaling enriched in high-risk group, involving in HSCs or LSCs anchoring to BM, which implicated in LSCs survival and chemotherapy resistance. B7-H3 (CD276) and CD276 would be the potential immune targets in high-risk group. The risk score model may help in distinguishing immune and molecular characteristics, predicting patient outcomes. Nature Publishing Group UK 2023-09-20 /pmc/articles/PMC10511414/ /pubmed/37730831 http://dx.doi.org/10.1038/s41598-023-42700-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Huang, Wanxue
Zheng, Shasha
Wang, Qi
Zhao, Na
Long, Zhiguo
Identification and validation of a prognostic risk-scoring model based on the level of TIM-3 expression in acute myeloid leukemia
title Identification and validation of a prognostic risk-scoring model based on the level of TIM-3 expression in acute myeloid leukemia
title_full Identification and validation of a prognostic risk-scoring model based on the level of TIM-3 expression in acute myeloid leukemia
title_fullStr Identification and validation of a prognostic risk-scoring model based on the level of TIM-3 expression in acute myeloid leukemia
title_full_unstemmed Identification and validation of a prognostic risk-scoring model based on the level of TIM-3 expression in acute myeloid leukemia
title_short Identification and validation of a prognostic risk-scoring model based on the level of TIM-3 expression in acute myeloid leukemia
title_sort identification and validation of a prognostic risk-scoring model based on the level of tim-3 expression in acute myeloid leukemia
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10511414/
https://www.ncbi.nlm.nih.gov/pubmed/37730831
http://dx.doi.org/10.1038/s41598-023-42700-2
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