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Custom tuning of Rieske oxygenase reactivity

Rieske oxygenases use a Rieske-type [2Fe-2S] cluster and a mononuclear iron center to initiate a range of chemical transformations. However, few details exist regarding how this catalytic scaffold can be predictively tuned to catalyze divergent reactions. Therefore, in this work, using a combination...

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Autores principales: Tian, Jiayi, Liu, Jianxin, Knapp, Madison, Donnan, Patrick H., Boggs, David G., Bridwell-Rabb, Jennifer
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10511449/
https://www.ncbi.nlm.nih.gov/pubmed/37730711
http://dx.doi.org/10.1038/s41467-023-41428-x
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author Tian, Jiayi
Liu, Jianxin
Knapp, Madison
Donnan, Patrick H.
Boggs, David G.
Bridwell-Rabb, Jennifer
author_facet Tian, Jiayi
Liu, Jianxin
Knapp, Madison
Donnan, Patrick H.
Boggs, David G.
Bridwell-Rabb, Jennifer
author_sort Tian, Jiayi
collection PubMed
description Rieske oxygenases use a Rieske-type [2Fe-2S] cluster and a mononuclear iron center to initiate a range of chemical transformations. However, few details exist regarding how this catalytic scaffold can be predictively tuned to catalyze divergent reactions. Therefore, in this work, using a combination of structural analyses, as well as substrate and rational protein-based engineering campaigns, we elucidate the architectural trends that govern catalytic outcome in the Rieske monooxygenase TsaM. We identify structural features that permit a substrate to be functionalized by TsaM and pinpoint active-site residues that can be targeted to manipulate reactivity. Exploiting these findings allowed for custom tuning of TsaM reactivity: substrates are identified that support divergent TsaM-catalyzed reactions and variants are created that exclusively catalyze dioxygenation or sequential monooxygenation chemistry. Importantly, we further leverage these trends to tune the reactivity of additional monooxygenase and dioxygenase enzymes, and thereby provide strategies to custom tune Rieske oxygenase reaction outcomes.
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spelling pubmed-105114492023-09-22 Custom tuning of Rieske oxygenase reactivity Tian, Jiayi Liu, Jianxin Knapp, Madison Donnan, Patrick H. Boggs, David G. Bridwell-Rabb, Jennifer Nat Commun Article Rieske oxygenases use a Rieske-type [2Fe-2S] cluster and a mononuclear iron center to initiate a range of chemical transformations. However, few details exist regarding how this catalytic scaffold can be predictively tuned to catalyze divergent reactions. Therefore, in this work, using a combination of structural analyses, as well as substrate and rational protein-based engineering campaigns, we elucidate the architectural trends that govern catalytic outcome in the Rieske monooxygenase TsaM. We identify structural features that permit a substrate to be functionalized by TsaM and pinpoint active-site residues that can be targeted to manipulate reactivity. Exploiting these findings allowed for custom tuning of TsaM reactivity: substrates are identified that support divergent TsaM-catalyzed reactions and variants are created that exclusively catalyze dioxygenation or sequential monooxygenation chemistry. Importantly, we further leverage these trends to tune the reactivity of additional monooxygenase and dioxygenase enzymes, and thereby provide strategies to custom tune Rieske oxygenase reaction outcomes. Nature Publishing Group UK 2023-09-20 /pmc/articles/PMC10511449/ /pubmed/37730711 http://dx.doi.org/10.1038/s41467-023-41428-x Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Tian, Jiayi
Liu, Jianxin
Knapp, Madison
Donnan, Patrick H.
Boggs, David G.
Bridwell-Rabb, Jennifer
Custom tuning of Rieske oxygenase reactivity
title Custom tuning of Rieske oxygenase reactivity
title_full Custom tuning of Rieske oxygenase reactivity
title_fullStr Custom tuning of Rieske oxygenase reactivity
title_full_unstemmed Custom tuning of Rieske oxygenase reactivity
title_short Custom tuning of Rieske oxygenase reactivity
title_sort custom tuning of rieske oxygenase reactivity
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10511449/
https://www.ncbi.nlm.nih.gov/pubmed/37730711
http://dx.doi.org/10.1038/s41467-023-41428-x
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