Cargando…
Protocol for refining metagenomic binning with BinSPreader
The analysis of metagenomic data obtained via high-throughput DNA sequencing is primarily carried out by a dedicated binning process involving clustering contigs, presumably belonging to the same species. Here, we present a protocol for improving the quality of binning using BinSPreader. We describe...
Autores principales: | Ochkalova, Sofia, Tolstoganov, Ivan, Lapidus, Alla, Korobeynikov, Anton |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10511927/ https://www.ncbi.nlm.nih.gov/pubmed/37405923 http://dx.doi.org/10.1016/j.xpro.2023.102417 |
Ejemplares similares
-
BinSPreader: Refine binning results for fuller MAG reconstruction
por: Tolstoganov, Ivan, et al.
Publicado: (2022) -
Improving metagenomic binning results with overlapped bins using assembly graphs
por: Mallawaarachchi, Vijini G., et al.
Publicado: (2021) -
ICoVeR – an interactive visualization tool for verification and refinement of metagenomic bins
por: Broeksema, Bertjan, et al.
Publicado: (2017) -
VizBin - an application for reference-independent visualization and human-augmented binning of metagenomic data
por: Laczny, Cedric C, et al.
Publicado: (2015) -
Influence of the bin to bin and inside bin correlations on measured quantities
por: Perevoztchikov, V, et al.
Publicado: (1999)