Cargando…

KidneyGPS: a user-friendly web application to help prioritize kidney function genes and variants based on evidence from genome-wide association studies

BACKGROUND: Genome-wide association studies (GWAS) have identified hundreds of genetic loci associated with kidney function. By combining these findings with post-GWAS information (e.g., statistical fine-mapping to identify independent association signals and to narrow down signals to causal variant...

Descripción completa

Detalles Bibliográficos
Autores principales:	Stanzick, Kira J., Stark, Klaus J., Gorski, Mathias, Schödel, Johannes, Krüger, René, Kronenberg, Florian, Warth, Richard, Heid, Iris M., Winkler, Thomas W.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2023
Materias:	Database
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10512588/ https://www.ncbi.nlm.nih.gov/pubmed/37735349 http://dx.doi.org/10.1186/s12859-023-05472-0

Ejemplares similares

Discovery and prioritization of variants and genes for kidney function in >1.2 million individuals
por: Stanzick, Kira J., et al.
Publicado: (2021)

Overview of the Alberta Kidney Disease Network
por: Hemmelgarn, Brenda R, et al.
Publicado: (2009)

CDKD: a clinical database of kidney diseases
por: Singh, Sanjay Kr, et al.
Publicado: (2012)

Satellog: A database for the identification and prioritization of satellite repeats in disease association studies
por: Missirlis, Perseus I, et al.
Publicado: (2005)

Polygenic scores for estimated glomerular filtration rate in a population of general adults and elderly – comparative results from the KORA and AugUR study
por: Herold, Janina M., et al.
Publicado: (2023)

A database of schemes that prioritize sites and species based on their conservation value: focusing business on biodiversity
por: Blundell, Arthur G, et al.
Publicado: (2007)

CKD.QLD: establishment of a chronic kidney disease [CKD] registry in Queensland, Australia
por: Venuthurupalli, Sree K., et al.
Publicado: (2017)

T-psi-C: user friendly database of tRNA sequences and structures
por: Sajek, Marcin Piotr, et al.
Publicado: (2020)

Avian Immunome DB: an example of a user-friendly interface for extracting genetic information
por: Mueller, Ralf C., et al.
Publicado: (2020)

PoPoolation DB: a user-friendly web-based database for the retrieval of natural polymorphisms in Drosophila
por: Pandey, Ram Vinay, et al.
Publicado: (2011)

The EKiTE network (epidemiology in kidney transplantation - a European validated database): an initiative epidemiological and translational European collaborative research
por: Lorent, M., et al.
Publicado: (2019)

BioGPS: building your own mash-up of gene annotations and expression profiles
por: Wu, Chunlei, et al.
Publicado: (2016)

eCOMPAGT integrates mtDNA: import, validation and export of mitochondrial DNA profiles for population genetics, tumour dynamics and genotype-phenotype association studies
por: Weißensteiner, Hansi, et al.
Publicado: (2010)

eCOMPAGT – efficient Combination and Management of Phenotypes and Genotypes for Genetic Epidemiology
por: Schönherr, Sebastian, et al.
Publicado: (2009)

Target-Pathogen: a structural bioinformatic approach to prioritize drug targets in pathogens
por: Sosa, Ezequiel J, et al.
Publicado: (2018)

DNA extraction from clotted blood in genotyping quality
por: Stanzick, Kira J, et al.
Publicado: (2023)

Project Score database: a resource for investigating cancer cell dependencies and prioritizing therapeutic targets
por: Dwane, Lisa, et al.
Publicado: (2020)

PopHumanVar: an interactive application for the functional characterization and prioritization of adaptive genomic variants in humans
por: Colomer-Vilaplana, Aina, et al.
Publicado: (2021)

GeneFriends: gene co-expression databases and tools for humans and model organisms
por: Raina, Priyanka, et al.
Publicado: (2022)

Investigating the modulation of genetic effects on late AMD by age and sex: Lessons learned and two additional loci
por: Winkler, Thomas W., et al.
Publicado: (2018)

GeneFriends: a human RNA-seq-based gene and transcript co-expression database
por: van Dam, Sipko, et al.
Publicado: (2014)

Noradrenaline and the kidney: friends or foes?
por: Bellomo, Rinaldo, et al.
Publicado: (2001)

Genome3D: exploiting structure to help users understand their sequences
por: Lewis, Tony E., et al.
Publicado: (2014)

LRRML: a conformational database and an XML description of leucine-rich repeats (LRRs)
por: Wei, Tiandi, et al.
Publicado: (2008)

SuperLigands – a database of ligand structures derived from the Protein Data Bank
por: Michalsky, Elke, et al.
Publicado: (2005)

A new bioinformatics tool to help assess the significance of BRCA1 variants
por: Cusin, Isabelle, et al.
Publicado: (2018)

On the differences between mega‐ and meta‐imputation and analysis exemplified on the genetics of age‐related macular degeneration
por: Gorski, Mathias, et al.
Publicado: (2019)

Hypoxia controls expression of kidney-pathogenic MUC1 variants
por: Naas, Stephanie, et al.
Publicado: (2023)

ggpubfigs: Colorblind-Friendly Color Palettes and ggplot2 Graphic System Extensions for Publication-Quality Scientific Figures
por: Steenwyk, Jacob L., et al.
Publicado: (2021)

An extensible framework and database of infectious disease for biosurveillance
por: Daughton, Ashlynn R., et al.
Publicado: (2017)

GenderMedDB: an interactive database of sex and gender-specific medical literature
por: Oertelt-Prigione, Sabine, et al.
Publicado: (2014)

Color Data v2: a user-friendly, open-access database with hereditary cancer and hereditary cardiovascular conditions datasets
por: Berger, Mark J, et al.
Publicado: (2020)

Herbal medicines and kidney; friends or foes?
por: Asgari, Azam
Publicado: (2014)

Identification of Potential Biomarkers of Prognosis-Related Long Non-Coding RNA (lncRNA) in Pediatric Rhabdoid Tumor of the Kidney Based on ceRNA Networks
por: Wu, Xiongwei, et al.
Publicado: (2020)

KidneyNetwork: using kidney-derived gene expression data to predict and prioritize novel genes involved in kidney disease
por: Boulogne, Floranne, et al.
Publicado: (2023)

Guidelines; from foe to friend? Comparative interviews with GPs in Norway and Denmark
por: Carlsen, Benedicte, et al.
Publicado: (2010)

Association Between Nadir Hematocrit and Severe Acute Kidney Injury After Off-Pump Coronary Artery Bypass Graft Surgery: A Retrospective Cohort Study Based on the MIMIC-IV Database
por: Deng, Yisen, et al.
Publicado: (2022)

Alloy information helps prioritize material criticality lists
por: Graedel, T. E., et al.
Publicado: (2022)

Approaches to detect genetic effects that differ between two strata in genome-wide meta-analyses: Recommendations based on a systematic evaluation
por: Winkler, Thomas W., et al.
Publicado: (2017)

Glucose Transporters in Diabetic Kidney Disease—Friends or Foes?
por: Wasik, Anita A., et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_eul08qn3ok507b8od9i0ok7iuh