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Causal inference from cross-sectional earth system data with geographical convergent cross mapping

Causal inference in complex systems has been largely promoted by the proposal of some advanced temporal causation models. However, temporal models have serious limitations when time series data are not available or present insignificant variations, which causes a common challenge for earth system sc...

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Autores principales: Gao, Bingbo, Yang, Jianyu, Chen, Ziyue, Sugihara, George, Li, Manchun, Stein, Alfred, Kwan, Mei-Po, Wang, Jinfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10514035/
https://www.ncbi.nlm.nih.gov/pubmed/37735466
http://dx.doi.org/10.1038/s41467-023-41619-6
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author Gao, Bingbo
Yang, Jianyu
Chen, Ziyue
Sugihara, George
Li, Manchun
Stein, Alfred
Kwan, Mei-Po
Wang, Jinfeng
author_facet Gao, Bingbo
Yang, Jianyu
Chen, Ziyue
Sugihara, George
Li, Manchun
Stein, Alfred
Kwan, Mei-Po
Wang, Jinfeng
author_sort Gao, Bingbo
collection PubMed
description Causal inference in complex systems has been largely promoted by the proposal of some advanced temporal causation models. However, temporal models have serious limitations when time series data are not available or present insignificant variations, which causes a common challenge for earth system science. Meanwhile, there are few spatial causation models for fully exploring the rich spatial cross-sectional data in Earth systems. The generalized embedding theorem proves that observations can be combined together to construct the state space of the dynamic system, and if two variables are from the same dynamic system, they are causally linked. Inspired by this, here we show a Geographical Convergent Cross Mapping (GCCM) model for spatial causal inference with spatial cross-sectional data-based cross-mapping prediction in reconstructed state space. Three typical cases, where clearly existing causations cannot be measured through temporal models, demonstrate that GCCM could detect weak-moderate causations when the correlation is not significant. When the coupling between two variables is significant and strong, GCCM is advantageous in identifying the primary causation direction and better revealing the bidirectional asymmetric causation, overcoming the mirroring effect.
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spelling pubmed-105140352023-09-23 Causal inference from cross-sectional earth system data with geographical convergent cross mapping Gao, Bingbo Yang, Jianyu Chen, Ziyue Sugihara, George Li, Manchun Stein, Alfred Kwan, Mei-Po Wang, Jinfeng Nat Commun Article Causal inference in complex systems has been largely promoted by the proposal of some advanced temporal causation models. However, temporal models have serious limitations when time series data are not available or present insignificant variations, which causes a common challenge for earth system science. Meanwhile, there are few spatial causation models for fully exploring the rich spatial cross-sectional data in Earth systems. The generalized embedding theorem proves that observations can be combined together to construct the state space of the dynamic system, and if two variables are from the same dynamic system, they are causally linked. Inspired by this, here we show a Geographical Convergent Cross Mapping (GCCM) model for spatial causal inference with spatial cross-sectional data-based cross-mapping prediction in reconstructed state space. Three typical cases, where clearly existing causations cannot be measured through temporal models, demonstrate that GCCM could detect weak-moderate causations when the correlation is not significant. When the coupling between two variables is significant and strong, GCCM is advantageous in identifying the primary causation direction and better revealing the bidirectional asymmetric causation, overcoming the mirroring effect. Nature Publishing Group UK 2023-09-21 /pmc/articles/PMC10514035/ /pubmed/37735466 http://dx.doi.org/10.1038/s41467-023-41619-6 Text en © The Author(s) 2023, corrected publication 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Gao, Bingbo
Yang, Jianyu
Chen, Ziyue
Sugihara, George
Li, Manchun
Stein, Alfred
Kwan, Mei-Po
Wang, Jinfeng
Causal inference from cross-sectional earth system data with geographical convergent cross mapping
title Causal inference from cross-sectional earth system data with geographical convergent cross mapping
title_full Causal inference from cross-sectional earth system data with geographical convergent cross mapping
title_fullStr Causal inference from cross-sectional earth system data with geographical convergent cross mapping
title_full_unstemmed Causal inference from cross-sectional earth system data with geographical convergent cross mapping
title_short Causal inference from cross-sectional earth system data with geographical convergent cross mapping
title_sort causal inference from cross-sectional earth system data with geographical convergent cross mapping
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10514035/
https://www.ncbi.nlm.nih.gov/pubmed/37735466
http://dx.doi.org/10.1038/s41467-023-41619-6
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