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M6A regulator methylation patterns and characteristics of immunity in acute ST-segment elevation myocardial infarction

M6A methylation is the most prevalent and abundant RNA modification in mammals. Although there are many studies on the regulatory role of m6A methylation in the immune response, the m6A regulators in the pathogenesis of acute ST-segment elevation myocardial infarction (STEMI) remain unclear. We comp...

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Autores principales: Yang, Jingqi, Shangguan, Qing, Xie, Guobo, Yang, Ming, Sheng, Guotai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10514189/
https://www.ncbi.nlm.nih.gov/pubmed/37735234
http://dx.doi.org/10.1038/s41598-023-42959-5
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author Yang, Jingqi
Shangguan, Qing
Xie, Guobo
Yang, Ming
Sheng, Guotai
author_facet Yang, Jingqi
Shangguan, Qing
Xie, Guobo
Yang, Ming
Sheng, Guotai
author_sort Yang, Jingqi
collection PubMed
description M6A methylation is the most prevalent and abundant RNA modification in mammals. Although there are many studies on the regulatory role of m6A methylation in the immune response, the m6A regulators in the pathogenesis of acute ST-segment elevation myocardial infarction (STEMI) remain unclear. We comprehensively analysed the role of m6A regulators in STEMI and built a predictive model, revealing the relationship between m6A methylations and the immune microenvironment. Differential analysis revealed that 18 of 24 m6A regulators were significantly differentially expressed, and there were substantial interactions between the m6A regulator. Then, we established a classifier and nomogram model based on 6 m6A regulators, which can easily distinguish the STEMI and control samples. Finally, two distinct m6A subtypes were obtained and significantly differentially expressed in terms of infiltrating immunocyte abundance, immune reaction activity and human leukocyte antigen genes. Three hub m6A phenotype related genes (RAC2, RELA, and WAS) in the midnightblue module were identified by weighted gene coexpression network analysis, and were associated with immunity. These findings suggest that m6A modification and the immune microenvironment play a key role in the pathogenesis of STEMI.
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spelling pubmed-105141892023-09-23 M6A regulator methylation patterns and characteristics of immunity in acute ST-segment elevation myocardial infarction Yang, Jingqi Shangguan, Qing Xie, Guobo Yang, Ming Sheng, Guotai Sci Rep Article M6A methylation is the most prevalent and abundant RNA modification in mammals. Although there are many studies on the regulatory role of m6A methylation in the immune response, the m6A regulators in the pathogenesis of acute ST-segment elevation myocardial infarction (STEMI) remain unclear. We comprehensively analysed the role of m6A regulators in STEMI and built a predictive model, revealing the relationship between m6A methylations and the immune microenvironment. Differential analysis revealed that 18 of 24 m6A regulators were significantly differentially expressed, and there were substantial interactions between the m6A regulator. Then, we established a classifier and nomogram model based on 6 m6A regulators, which can easily distinguish the STEMI and control samples. Finally, two distinct m6A subtypes were obtained and significantly differentially expressed in terms of infiltrating immunocyte abundance, immune reaction activity and human leukocyte antigen genes. Three hub m6A phenotype related genes (RAC2, RELA, and WAS) in the midnightblue module were identified by weighted gene coexpression network analysis, and were associated with immunity. These findings suggest that m6A modification and the immune microenvironment play a key role in the pathogenesis of STEMI. Nature Publishing Group UK 2023-09-21 /pmc/articles/PMC10514189/ /pubmed/37735234 http://dx.doi.org/10.1038/s41598-023-42959-5 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Yang, Jingqi
Shangguan, Qing
Xie, Guobo
Yang, Ming
Sheng, Guotai
M6A regulator methylation patterns and characteristics of immunity in acute ST-segment elevation myocardial infarction
title M6A regulator methylation patterns and characteristics of immunity in acute ST-segment elevation myocardial infarction
title_full M6A regulator methylation patterns and characteristics of immunity in acute ST-segment elevation myocardial infarction
title_fullStr M6A regulator methylation patterns and characteristics of immunity in acute ST-segment elevation myocardial infarction
title_full_unstemmed M6A regulator methylation patterns and characteristics of immunity in acute ST-segment elevation myocardial infarction
title_short M6A regulator methylation patterns and characteristics of immunity in acute ST-segment elevation myocardial infarction
title_sort m6a regulator methylation patterns and characteristics of immunity in acute st-segment elevation myocardial infarction
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10514189/
https://www.ncbi.nlm.nih.gov/pubmed/37735234
http://dx.doi.org/10.1038/s41598-023-42959-5
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