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A framework for future national pediatric pandemic respiratory disease severity triage: The HHS pediatric COVID-19 data challenge

INTRODUCTION: With persistent incidence, incomplete vaccination rates, confounding respiratory illnesses, and few therapeutic interventions available, COVID-19 continues to be a burden on the pediatric population. During a surge, it is difficult for hospitals to direct limited healthcare resources e...

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Autores principales: Bergquist, Timothy, Wax, Marie, Bennett, Tellen D., Moffitt, Richard A., Gao, Jifan, Chen, Guanhua, Telenti, Amalio, Maher, M. Cyrus, Bartha, Istvan, Walker, Lorne, Orwoll, Benjamin E., Mishra, Meenakshi, Alamgir, Joy, Cragin, Bruce L., Ferguson, Christopher H., Wong, Hui-Hsing, Deslattes Mays, Anne, Misquitta, Leonie, DeMarco, Kerry A., Sciarretta, Kimberly L., Patel, Sandeep A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cambridge University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10514686/
https://www.ncbi.nlm.nih.gov/pubmed/37745933
http://dx.doi.org/10.1017/cts.2023.549
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author Bergquist, Timothy
Wax, Marie
Bennett, Tellen D.
Moffitt, Richard A.
Gao, Jifan
Chen, Guanhua
Telenti, Amalio
Maher, M. Cyrus
Bartha, Istvan
Walker, Lorne
Orwoll, Benjamin E.
Mishra, Meenakshi
Alamgir, Joy
Cragin, Bruce L.
Ferguson, Christopher H.
Wong, Hui-Hsing
Deslattes Mays, Anne
Misquitta, Leonie
DeMarco, Kerry A.
Sciarretta, Kimberly L.
Patel, Sandeep A.
author_facet Bergquist, Timothy
Wax, Marie
Bennett, Tellen D.
Moffitt, Richard A.
Gao, Jifan
Chen, Guanhua
Telenti, Amalio
Maher, M. Cyrus
Bartha, Istvan
Walker, Lorne
Orwoll, Benjamin E.
Mishra, Meenakshi
Alamgir, Joy
Cragin, Bruce L.
Ferguson, Christopher H.
Wong, Hui-Hsing
Deslattes Mays, Anne
Misquitta, Leonie
DeMarco, Kerry A.
Sciarretta, Kimberly L.
Patel, Sandeep A.
author_sort Bergquist, Timothy
collection PubMed
description INTRODUCTION: With persistent incidence, incomplete vaccination rates, confounding respiratory illnesses, and few therapeutic interventions available, COVID-19 continues to be a burden on the pediatric population. During a surge, it is difficult for hospitals to direct limited healthcare resources effectively. While the overwhelming majority of pediatric infections are mild, there have been life-threatening exceptions that illuminated the need to proactively identify pediatric patients at risk of severe COVID-19 and other respiratory infectious diseases. However, a nationwide capability for developing validated computational tools to identify pediatric patients at risk using real-world data does not exist. METHODS: HHS ASPR BARDA sought, through the power of competition in a challenge, to create computational models to address two clinically important questions using the National COVID Cohort Collaborative: (1) Of pediatric patients who test positive for COVID-19 in an outpatient setting, who are at risk for hospitalization? (2) Of pediatric patients who test positive for COVID-19 and are hospitalized, who are at risk for needing mechanical ventilation or cardiovascular interventions? RESULTS: This challenge was the first, multi-agency, coordinated computational challenge carried out by the federal government as a response to a public health emergency. Fifty-five computational models were evaluated across both tasks and two winners and three honorable mentions were selected. CONCLUSION: This challenge serves as a framework for how the government, research communities, and large data repositories can be brought together to source solutions when resources are strapped during a pandemic.
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spelling pubmed-105146862023-09-23 A framework for future national pediatric pandemic respiratory disease severity triage: The HHS pediatric COVID-19 data challenge Bergquist, Timothy Wax, Marie Bennett, Tellen D. Moffitt, Richard A. Gao, Jifan Chen, Guanhua Telenti, Amalio Maher, M. Cyrus Bartha, Istvan Walker, Lorne Orwoll, Benjamin E. Mishra, Meenakshi Alamgir, Joy Cragin, Bruce L. Ferguson, Christopher H. Wong, Hui-Hsing Deslattes Mays, Anne Misquitta, Leonie DeMarco, Kerry A. Sciarretta, Kimberly L. Patel, Sandeep A. J Clin Transl Sci Research Article INTRODUCTION: With persistent incidence, incomplete vaccination rates, confounding respiratory illnesses, and few therapeutic interventions available, COVID-19 continues to be a burden on the pediatric population. During a surge, it is difficult for hospitals to direct limited healthcare resources effectively. While the overwhelming majority of pediatric infections are mild, there have been life-threatening exceptions that illuminated the need to proactively identify pediatric patients at risk of severe COVID-19 and other respiratory infectious diseases. However, a nationwide capability for developing validated computational tools to identify pediatric patients at risk using real-world data does not exist. METHODS: HHS ASPR BARDA sought, through the power of competition in a challenge, to create computational models to address two clinically important questions using the National COVID Cohort Collaborative: (1) Of pediatric patients who test positive for COVID-19 in an outpatient setting, who are at risk for hospitalization? (2) Of pediatric patients who test positive for COVID-19 and are hospitalized, who are at risk for needing mechanical ventilation or cardiovascular interventions? RESULTS: This challenge was the first, multi-agency, coordinated computational challenge carried out by the federal government as a response to a public health emergency. Fifty-five computational models were evaluated across both tasks and two winners and three honorable mentions were selected. CONCLUSION: This challenge serves as a framework for how the government, research communities, and large data repositories can be brought together to source solutions when resources are strapped during a pandemic. Cambridge University Press 2023-07-10 /pmc/articles/PMC10514686/ /pubmed/37745933 http://dx.doi.org/10.1017/cts.2023.549 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by-nc-nd/4.0/This is an Open Access article, distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided that no alterations are made and the original article is properly cited. The written permission of Cambridge University Press must be obtained prior to any commercial use and/or adaptation of the article.
spellingShingle Research Article
Bergquist, Timothy
Wax, Marie
Bennett, Tellen D.
Moffitt, Richard A.
Gao, Jifan
Chen, Guanhua
Telenti, Amalio
Maher, M. Cyrus
Bartha, Istvan
Walker, Lorne
Orwoll, Benjamin E.
Mishra, Meenakshi
Alamgir, Joy
Cragin, Bruce L.
Ferguson, Christopher H.
Wong, Hui-Hsing
Deslattes Mays, Anne
Misquitta, Leonie
DeMarco, Kerry A.
Sciarretta, Kimberly L.
Patel, Sandeep A.
A framework for future national pediatric pandemic respiratory disease severity triage: The HHS pediatric COVID-19 data challenge
title A framework for future national pediatric pandemic respiratory disease severity triage: The HHS pediatric COVID-19 data challenge
title_full A framework for future national pediatric pandemic respiratory disease severity triage: The HHS pediatric COVID-19 data challenge
title_fullStr A framework for future national pediatric pandemic respiratory disease severity triage: The HHS pediatric COVID-19 data challenge
title_full_unstemmed A framework for future national pediatric pandemic respiratory disease severity triage: The HHS pediatric COVID-19 data challenge
title_short A framework for future national pediatric pandemic respiratory disease severity triage: The HHS pediatric COVID-19 data challenge
title_sort framework for future national pediatric pandemic respiratory disease severity triage: the hhs pediatric covid-19 data challenge
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10514686/
https://www.ncbi.nlm.nih.gov/pubmed/37745933
http://dx.doi.org/10.1017/cts.2023.549
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