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CYFIP2 serves as a prognostic biomarker and correlates with tumor immune microenvironment in human cancers
BACKGROUND: The mechanisms whereby CYFIP2 acts in tumor development and drives immune infiltration have been poorly explored. Thus, this study aimed to identifying the role of CYFIP2 in tumors and immune response. METHODS: In this study, we first explored expression patterns, diagnostic role and pro...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10515071/ https://www.ncbi.nlm.nih.gov/pubmed/37735711 http://dx.doi.org/10.1186/s40001-023-01366-2 |
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author | Peng, Qiliang Ren, Bixin Xin, Kedao Liu, Weihui Alam, Md Shahin Yang, Yinyin Gu, Xuhao Zhu, Yaqun Tian, Ye |
author_facet | Peng, Qiliang Ren, Bixin Xin, Kedao Liu, Weihui Alam, Md Shahin Yang, Yinyin Gu, Xuhao Zhu, Yaqun Tian, Ye |
author_sort | Peng, Qiliang |
collection | PubMed |
description | BACKGROUND: The mechanisms whereby CYFIP2 acts in tumor development and drives immune infiltration have been poorly explored. Thus, this study aimed to identifying the role of CYFIP2 in tumors and immune response. METHODS: In this study, we first explored expression patterns, diagnostic role and prognostic value of CYFIP2 in cancers, particularly in lung adenocarcinoma (LUAD). Then, we performed functional enrichment, genetic alterations, DNA methylation analysis, and immune cell infiltration analysis of CYFIP2 to uncover its potential mechanisms involved in immune microenvironment. RESULTS: We found that CYFIP2 significantly differentially expressed in different tumors including LUAD compared with normal tissues. Furthermore, CYFIP2 was found to be significantly correlated with clinical parameters in LUAD. According to the diagnostic and survival analysis, CYFIP2 may be employed as a potential diagnostic and prognostic biomarker. Moreover, genetic alterations revealed that mutation of CYFIP2 was the main types of alterations in different cancers. DNA methylation analysis indicated that CYFIP2 mRNA expression correlated with hypomethylation. Afterwards, functional enrichment analysis uncovered that CYFIP2 was involved in tumor-associated and immune-related pathways. Immune infiltration analysis indicated that CYFIP2 was significantly correlated with immune cells infiltration. In particular, CYFIP2 was strongly linked with immune microenvironment scores. Additionally, CYFIP2 exhibited a significant relationship with immune regulators and immune-related genes including chemokines, chemokines receptors, and MHC genes. CONCLUSION: Our results suggested that CYFIP2 may serve as a prognostic cancer biomarker for determining prognosis and might be a promising therapeutic strategy for tumor immunotherapy. |
format | Online Article Text |
id | pubmed-10515071 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-105150712023-09-23 CYFIP2 serves as a prognostic biomarker and correlates with tumor immune microenvironment in human cancers Peng, Qiliang Ren, Bixin Xin, Kedao Liu, Weihui Alam, Md Shahin Yang, Yinyin Gu, Xuhao Zhu, Yaqun Tian, Ye Eur J Med Res Research BACKGROUND: The mechanisms whereby CYFIP2 acts in tumor development and drives immune infiltration have been poorly explored. Thus, this study aimed to identifying the role of CYFIP2 in tumors and immune response. METHODS: In this study, we first explored expression patterns, diagnostic role and prognostic value of CYFIP2 in cancers, particularly in lung adenocarcinoma (LUAD). Then, we performed functional enrichment, genetic alterations, DNA methylation analysis, and immune cell infiltration analysis of CYFIP2 to uncover its potential mechanisms involved in immune microenvironment. RESULTS: We found that CYFIP2 significantly differentially expressed in different tumors including LUAD compared with normal tissues. Furthermore, CYFIP2 was found to be significantly correlated with clinical parameters in LUAD. According to the diagnostic and survival analysis, CYFIP2 may be employed as a potential diagnostic and prognostic biomarker. Moreover, genetic alterations revealed that mutation of CYFIP2 was the main types of alterations in different cancers. DNA methylation analysis indicated that CYFIP2 mRNA expression correlated with hypomethylation. Afterwards, functional enrichment analysis uncovered that CYFIP2 was involved in tumor-associated and immune-related pathways. Immune infiltration analysis indicated that CYFIP2 was significantly correlated with immune cells infiltration. In particular, CYFIP2 was strongly linked with immune microenvironment scores. Additionally, CYFIP2 exhibited a significant relationship with immune regulators and immune-related genes including chemokines, chemokines receptors, and MHC genes. CONCLUSION: Our results suggested that CYFIP2 may serve as a prognostic cancer biomarker for determining prognosis and might be a promising therapeutic strategy for tumor immunotherapy. BioMed Central 2023-09-21 /pmc/articles/PMC10515071/ /pubmed/37735711 http://dx.doi.org/10.1186/s40001-023-01366-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Peng, Qiliang Ren, Bixin Xin, Kedao Liu, Weihui Alam, Md Shahin Yang, Yinyin Gu, Xuhao Zhu, Yaqun Tian, Ye CYFIP2 serves as a prognostic biomarker and correlates with tumor immune microenvironment in human cancers |
title | CYFIP2 serves as a prognostic biomarker and correlates with tumor immune microenvironment in human cancers |
title_full | CYFIP2 serves as a prognostic biomarker and correlates with tumor immune microenvironment in human cancers |
title_fullStr | CYFIP2 serves as a prognostic biomarker and correlates with tumor immune microenvironment in human cancers |
title_full_unstemmed | CYFIP2 serves as a prognostic biomarker and correlates with tumor immune microenvironment in human cancers |
title_short | CYFIP2 serves as a prognostic biomarker and correlates with tumor immune microenvironment in human cancers |
title_sort | cyfip2 serves as a prognostic biomarker and correlates with tumor immune microenvironment in human cancers |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10515071/ https://www.ncbi.nlm.nih.gov/pubmed/37735711 http://dx.doi.org/10.1186/s40001-023-01366-2 |
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