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Topological Entanglement of Linear Catenanes: Knots and Threadings
[Image: see text] We used molecular dynamics simulations to investigate the self-entanglements of the collapsed linear catenanes. We found two different types of topologically complex states. First, we observed numerous long-lived knotting events of the catenane backbone. However, comparison with co...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10515615/ https://www.ncbi.nlm.nih.gov/pubmed/37638542 http://dx.doi.org/10.1021/acsmacrolett.3c00315 |
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author | Dehaghani, Zahra Ahmadian Chiarantoni, Pietro Micheletti, Cristian |
author_facet | Dehaghani, Zahra Ahmadian Chiarantoni, Pietro Micheletti, Cristian |
author_sort | Dehaghani, Zahra Ahmadian |
collection | PubMed |
description | [Image: see text] We used molecular dynamics simulations to investigate the self-entanglements of the collapsed linear catenanes. We found two different types of topologically complex states. First, we observed numerous long-lived knotting events of the catenane backbone. However, comparison with conventional polymers reveals that knots are suppressed in catenanes. Next, we observed topologically complex states with no analogue in polymers, where a concatenated ring was threaded by other near or distal rings sliding through it. Differently from knots, these threaded states can disentangle by becoming fully tightened. A detailed thermodynamic and microscopic analysis is employed to rationalize the persistence of threaded states, which can survive significant internal reorganizations of the entire catenane. We finally discuss the broader implications of these previously unreported types of entanglements for other systems, such as noncollapsed and interacting catenanes. |
format | Online Article Text |
id | pubmed-10515615 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-105156152023-09-23 Topological Entanglement of Linear Catenanes: Knots and Threadings Dehaghani, Zahra Ahmadian Chiarantoni, Pietro Micheletti, Cristian ACS Macro Lett [Image: see text] We used molecular dynamics simulations to investigate the self-entanglements of the collapsed linear catenanes. We found two different types of topologically complex states. First, we observed numerous long-lived knotting events of the catenane backbone. However, comparison with conventional polymers reveals that knots are suppressed in catenanes. Next, we observed topologically complex states with no analogue in polymers, where a concatenated ring was threaded by other near or distal rings sliding through it. Differently from knots, these threaded states can disentangle by becoming fully tightened. A detailed thermodynamic and microscopic analysis is employed to rationalize the persistence of threaded states, which can survive significant internal reorganizations of the entire catenane. We finally discuss the broader implications of these previously unreported types of entanglements for other systems, such as noncollapsed and interacting catenanes. American Chemical Society 2023-08-28 /pmc/articles/PMC10515615/ /pubmed/37638542 http://dx.doi.org/10.1021/acsmacrolett.3c00315 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Dehaghani, Zahra Ahmadian Chiarantoni, Pietro Micheletti, Cristian Topological Entanglement of Linear Catenanes: Knots and Threadings |
title | Topological
Entanglement of Linear Catenanes: Knots
and Threadings |
title_full | Topological
Entanglement of Linear Catenanes: Knots
and Threadings |
title_fullStr | Topological
Entanglement of Linear Catenanes: Knots
and Threadings |
title_full_unstemmed | Topological
Entanglement of Linear Catenanes: Knots
and Threadings |
title_short | Topological
Entanglement of Linear Catenanes: Knots
and Threadings |
title_sort | topological
entanglement of linear catenanes: knots
and threadings |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10515615/ https://www.ncbi.nlm.nih.gov/pubmed/37638542 http://dx.doi.org/10.1021/acsmacrolett.3c00315 |
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