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Measuring, visualizing and diagnosing reference bias with biastools

A goal of recent alignment methods is to reduce reference bias, which occurs when reads containing non-reference alleles fail to align to their true point of origin. However, there is a lack of methods for systematically measuring, categorizing, and diagnosing reference bias. We present biastools, w...

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Detalles Bibliográficos
Autores principales: Lin, Mao-Jan, Iyer, Sheila, Chen, Nae-Chyun, Langmead, Ben
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10515925/
https://www.ncbi.nlm.nih.gov/pubmed/37745608
http://dx.doi.org/10.1101/2023.09.13.557552