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ReMIND: The Brain Resection Multimodal Imaging Database

The standard of care for brain tumors is maximal safe surgical resection as the first step. Neuronavigation augments the surgeon’s ability to achieve this but loses validity due to brain shift as surgery progresses. Moreover, many gliomas are difficult to distinguish from adjacent healthy brain tiss...

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Autores principales: Juvekar, Parikshit, Dorent, Reuben, Kögl, Fryderyk, Torio, Erickson, Barr, Colton, Rigolo, Laura, Galvin, Colin, Jowkar, Nick, Kazi, Anees, Haouchine, Nazim, Cheema, Harneet, Navab, Nassir, Pieper, Steve, Wells, William M., Bi, Wenya Linda, Golby, Alexandra, Frisken, Sarah, Kapur, Tina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10516086/
https://www.ncbi.nlm.nih.gov/pubmed/37745329
http://dx.doi.org/10.1101/2023.09.14.23295596
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author Juvekar, Parikshit
Dorent, Reuben
Kögl, Fryderyk
Torio, Erickson
Barr, Colton
Rigolo, Laura
Galvin, Colin
Jowkar, Nick
Kazi, Anees
Haouchine, Nazim
Cheema, Harneet
Navab, Nassir
Pieper, Steve
Wells, William M.
Bi, Wenya Linda
Golby, Alexandra
Frisken, Sarah
Kapur, Tina
author_facet Juvekar, Parikshit
Dorent, Reuben
Kögl, Fryderyk
Torio, Erickson
Barr, Colton
Rigolo, Laura
Galvin, Colin
Jowkar, Nick
Kazi, Anees
Haouchine, Nazim
Cheema, Harneet
Navab, Nassir
Pieper, Steve
Wells, William M.
Bi, Wenya Linda
Golby, Alexandra
Frisken, Sarah
Kapur, Tina
author_sort Juvekar, Parikshit
collection PubMed
description The standard of care for brain tumors is maximal safe surgical resection as the first step. Neuronavigation augments the surgeon’s ability to achieve this but loses validity due to brain shift as surgery progresses. Moreover, many gliomas are difficult to distinguish from adjacent healthy brain tissue. Intraoperative MRI (iMRI) is a useful surgical adjunct that can be used to visualize the residual tumor and brain shift. Intraoperative ultrasound (iUS) serves a similar purpose, while also being faster and easier to incorporate into the workflow. However, it provides lower contrast between tumor tissue and normal brain tissue as compared to intraoperative MRI. With the success of data-hungry Artificial Intelligence (AI)/Machine Learning (ML) algorithms in advancing the state of the art in medical image analysis, the benefits of sharing well-curated data can not be overstated. To this end, we provide here the largest publicly-available MRI and intraoperative ultrasound imaging database of surgically treated brain tumors, including gliomas (n=92), metastases (n=11), and others (n=11). This collection contains 369 preoperative MRI series, 320 3D intraoperative ultrasound series, 301 intraoperative MRI series, and 356 segmentations collected from 114 consecutive patients at a single institution. We expect this data to be a resource for computational research in brain shift and image analysis as well as for neurosurgical training in the interpretation of intraoperative ultrasound and iMRI.
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spelling pubmed-105160862023-09-23 ReMIND: The Brain Resection Multimodal Imaging Database Juvekar, Parikshit Dorent, Reuben Kögl, Fryderyk Torio, Erickson Barr, Colton Rigolo, Laura Galvin, Colin Jowkar, Nick Kazi, Anees Haouchine, Nazim Cheema, Harneet Navab, Nassir Pieper, Steve Wells, William M. Bi, Wenya Linda Golby, Alexandra Frisken, Sarah Kapur, Tina medRxiv Article The standard of care for brain tumors is maximal safe surgical resection as the first step. Neuronavigation augments the surgeon’s ability to achieve this but loses validity due to brain shift as surgery progresses. Moreover, many gliomas are difficult to distinguish from adjacent healthy brain tissue. Intraoperative MRI (iMRI) is a useful surgical adjunct that can be used to visualize the residual tumor and brain shift. Intraoperative ultrasound (iUS) serves a similar purpose, while also being faster and easier to incorporate into the workflow. However, it provides lower contrast between tumor tissue and normal brain tissue as compared to intraoperative MRI. With the success of data-hungry Artificial Intelligence (AI)/Machine Learning (ML) algorithms in advancing the state of the art in medical image analysis, the benefits of sharing well-curated data can not be overstated. To this end, we provide here the largest publicly-available MRI and intraoperative ultrasound imaging database of surgically treated brain tumors, including gliomas (n=92), metastases (n=11), and others (n=11). This collection contains 369 preoperative MRI series, 320 3D intraoperative ultrasound series, 301 intraoperative MRI series, and 356 segmentations collected from 114 consecutive patients at a single institution. We expect this data to be a resource for computational research in brain shift and image analysis as well as for neurosurgical training in the interpretation of intraoperative ultrasound and iMRI. Cold Spring Harbor Laboratory 2023-09-15 /pmc/articles/PMC10516086/ /pubmed/37745329 http://dx.doi.org/10.1101/2023.09.14.23295596 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Juvekar, Parikshit
Dorent, Reuben
Kögl, Fryderyk
Torio, Erickson
Barr, Colton
Rigolo, Laura
Galvin, Colin
Jowkar, Nick
Kazi, Anees
Haouchine, Nazim
Cheema, Harneet
Navab, Nassir
Pieper, Steve
Wells, William M.
Bi, Wenya Linda
Golby, Alexandra
Frisken, Sarah
Kapur, Tina
ReMIND: The Brain Resection Multimodal Imaging Database
title ReMIND: The Brain Resection Multimodal Imaging Database
title_full ReMIND: The Brain Resection Multimodal Imaging Database
title_fullStr ReMIND: The Brain Resection Multimodal Imaging Database
title_full_unstemmed ReMIND: The Brain Resection Multimodal Imaging Database
title_short ReMIND: The Brain Resection Multimodal Imaging Database
title_sort remind: the brain resection multimodal imaging database
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10516086/
https://www.ncbi.nlm.nih.gov/pubmed/37745329
http://dx.doi.org/10.1101/2023.09.14.23295596
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