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The Past, Present, and Future of the Brain Imaging Data Structure (BIDS)

The Brain Imaging Data Structure (BIDS) is a community-driven standard for the organization of data and metadata from a growing range of neuroscience modalities. This paper is meant as a history of how the standard has developed and grown over time. We outline the principles behind the project, the...

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Autores principales: Poldrack, Russell A., Markiewicz, Christopher J., Appelhoff, Stefan, Ashar, Yoni K., Auer, Tibor, Baillet, Sylvain, Bansal, Shashank, Beltrachini, Leandro, Bénar, Christian G., Bertazzoli, Giacomo, Bhogawar, Suyash, Blair, Ross W., Bortoletto, Marta, Boudreau, Mathieu, Brooks, Teon L., Calhoun, Vince D., Castelli, Filippo Maria, Clement, Patricia, Cohen, Alexander L., Cohen-Adad, Julien, D'Ambrosio, Sasha, de Hollander, Gilles, de la Iglesia-Vayá, María, de la Vega, Alejandro, Delorme, Arnaud, Devinsky, Orrin, Draschkow, Dejan, Duff, Eugene Paul, DuPre, Elizabeth, Earl, Eric, Esteban, Oscar, Feingold, Franklin W., Flandin, Guillaume, Galassi, Anthony, Gallitto, Giuseppe, Ganz, Melanie, Gau, Rémi, Gholam, James, Ghosh, Satrajit S., Giacomel, Alessio, Gillman, Ashley G., Gleeson, Padraig, Gramfort, Alexandre, Guay, Samuel, Guidali, Giacomo, Halchenko, Yaroslav O., Handwerker, Daniel A., Hardcastle, Nell, Herholz, Peer, Hermes, Dora, Honey, Christopher J., Innis, Robert B., Ioanas, Horea-Ioan, Jahn, Andrew, Karakuzu, Agah, Keator, David B., Kiar, Gregory, Kincses, Balint, Laird, Angela R., Lau, Jonathan C., Lazari, Alberto, Legarreta, Jon Haitz, Li, Adam, Li, Xiangrui, Love, Bradley C., Lu, Hanzhang, Maumet, Camille, Mazzamuto, Giacomo, Meisler, Steven L., Mikkelsen, Mark, Mutsaerts, Henk, Nichols, Thomas E., Nikolaidis, Aki, Nilsonne, Gustav, Niso, Guiomar, Norgaard, Martin, Okell, Thomas W., Oostenveld, Robert, Ort, Eduard, Park, Patrick J., Pawlik, Mateusz, Pernet, Cyril R., Pestilli, Franco, Petr, Jan, Phillips, Christophe, Poline, Jean-Baptiste, Pollonini, Luca, Raamana, Pradeep Reddy, Ritter, Petra, Rizzo, Gaia, Robbins, Kay A., Rockhill, Alexander P., Rogers, Christine, Rokem, Ariel, Rorden, Chris, Routier, Alexandre, Saborit-Torres, Jose Manuel, Salo, Taylor, Schirner, Michael, Smith, Robert E., Spisak, Tamas, Sprenger, Julia, Swann, Nicole C., Szinte, Martin, Takerkart, Sylvain, Thirion, Bertrand, Thomas, Adam G., Torabian, Sajjad, Varoquaux, Gael, Voytek, Bradley, Welzel, Julius, Wilson, Martin, Yarkoni, Tal, Gorgolewski, Krzysztof J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cornell University 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10516110/
https://www.ncbi.nlm.nih.gov/pubmed/37744469
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author Poldrack, Russell A.
Markiewicz, Christopher J.
Appelhoff, Stefan
Ashar, Yoni K.
Auer, Tibor
Baillet, Sylvain
Bansal, Shashank
Beltrachini, Leandro
Bénar, Christian G.
Bertazzoli, Giacomo
Bhogawar, Suyash
Blair, Ross W.
Bortoletto, Marta
Boudreau, Mathieu
Brooks, Teon L.
Calhoun, Vince D.
Castelli, Filippo Maria
Clement, Patricia
Cohen, Alexander L.
Cohen-Adad, Julien
D'Ambrosio, Sasha
de Hollander, Gilles
de la Iglesia-Vayá, María
de la Vega, Alejandro
Delorme, Arnaud
Devinsky, Orrin
Draschkow, Dejan
Duff, Eugene Paul
DuPre, Elizabeth
Earl, Eric
Esteban, Oscar
Feingold, Franklin W.
Flandin, Guillaume
Galassi, Anthony
Gallitto, Giuseppe
Ganz, Melanie
Gau, Rémi
Gholam, James
Ghosh, Satrajit S.
Giacomel, Alessio
Gillman, Ashley G.
Gleeson, Padraig
Gramfort, Alexandre
Guay, Samuel
Guidali, Giacomo
Halchenko, Yaroslav O.
Handwerker, Daniel A.
Hardcastle, Nell
Herholz, Peer
Hermes, Dora
Honey, Christopher J.
Innis, Robert B.
Ioanas, Horea-Ioan
Jahn, Andrew
Karakuzu, Agah
Keator, David B.
Kiar, Gregory
Kincses, Balint
Laird, Angela R.
Lau, Jonathan C.
Lazari, Alberto
Legarreta, Jon Haitz
Li, Adam
Li, Xiangrui
Love, Bradley C.
Lu, Hanzhang
Maumet, Camille
Mazzamuto, Giacomo
Meisler, Steven L.
Mikkelsen, Mark
Mutsaerts, Henk
Nichols, Thomas E.
Nikolaidis, Aki
Nilsonne, Gustav
Niso, Guiomar
Norgaard, Martin
Okell, Thomas W.
Oostenveld, Robert
Ort, Eduard
Park, Patrick J.
Pawlik, Mateusz
Pernet, Cyril R.
Pestilli, Franco
Petr, Jan
Phillips, Christophe
Poline, Jean-Baptiste
Pollonini, Luca
Raamana, Pradeep Reddy
Ritter, Petra
Rizzo, Gaia
Robbins, Kay A.
Rockhill, Alexander P.
Rogers, Christine
Rokem, Ariel
Rorden, Chris
Routier, Alexandre
Saborit-Torres, Jose Manuel
Salo, Taylor
Schirner, Michael
Smith, Robert E.
Spisak, Tamas
Sprenger, Julia
Swann, Nicole C.
Szinte, Martin
Takerkart, Sylvain
Thirion, Bertrand
Thomas, Adam G.
Torabian, Sajjad
Varoquaux, Gael
Voytek, Bradley
Welzel, Julius
Wilson, Martin
Yarkoni, Tal
Gorgolewski, Krzysztof J.
author_facet Poldrack, Russell A.
Markiewicz, Christopher J.
Appelhoff, Stefan
Ashar, Yoni K.
Auer, Tibor
Baillet, Sylvain
Bansal, Shashank
Beltrachini, Leandro
Bénar, Christian G.
Bertazzoli, Giacomo
Bhogawar, Suyash
Blair, Ross W.
Bortoletto, Marta
Boudreau, Mathieu
Brooks, Teon L.
Calhoun, Vince D.
Castelli, Filippo Maria
Clement, Patricia
Cohen, Alexander L.
Cohen-Adad, Julien
D'Ambrosio, Sasha
de Hollander, Gilles
de la Iglesia-Vayá, María
de la Vega, Alejandro
Delorme, Arnaud
Devinsky, Orrin
Draschkow, Dejan
Duff, Eugene Paul
DuPre, Elizabeth
Earl, Eric
Esteban, Oscar
Feingold, Franklin W.
Flandin, Guillaume
Galassi, Anthony
Gallitto, Giuseppe
Ganz, Melanie
Gau, Rémi
Gholam, James
Ghosh, Satrajit S.
Giacomel, Alessio
Gillman, Ashley G.
Gleeson, Padraig
Gramfort, Alexandre
Guay, Samuel
Guidali, Giacomo
Halchenko, Yaroslav O.
Handwerker, Daniel A.
Hardcastle, Nell
Herholz, Peer
Hermes, Dora
Honey, Christopher J.
Innis, Robert B.
Ioanas, Horea-Ioan
Jahn, Andrew
Karakuzu, Agah
Keator, David B.
Kiar, Gregory
Kincses, Balint
Laird, Angela R.
Lau, Jonathan C.
Lazari, Alberto
Legarreta, Jon Haitz
Li, Adam
Li, Xiangrui
Love, Bradley C.
Lu, Hanzhang
Maumet, Camille
Mazzamuto, Giacomo
Meisler, Steven L.
Mikkelsen, Mark
Mutsaerts, Henk
Nichols, Thomas E.
Nikolaidis, Aki
Nilsonne, Gustav
Niso, Guiomar
Norgaard, Martin
Okell, Thomas W.
Oostenveld, Robert
Ort, Eduard
Park, Patrick J.
Pawlik, Mateusz
Pernet, Cyril R.
Pestilli, Franco
Petr, Jan
Phillips, Christophe
Poline, Jean-Baptiste
Pollonini, Luca
Raamana, Pradeep Reddy
Ritter, Petra
Rizzo, Gaia
Robbins, Kay A.
Rockhill, Alexander P.
Rogers, Christine
Rokem, Ariel
Rorden, Chris
Routier, Alexandre
Saborit-Torres, Jose Manuel
Salo, Taylor
Schirner, Michael
Smith, Robert E.
Spisak, Tamas
Sprenger, Julia
Swann, Nicole C.
Szinte, Martin
Takerkart, Sylvain
Thirion, Bertrand
Thomas, Adam G.
Torabian, Sajjad
Varoquaux, Gael
Voytek, Bradley
Welzel, Julius
Wilson, Martin
Yarkoni, Tal
Gorgolewski, Krzysztof J.
author_sort Poldrack, Russell A.
collection PubMed
description The Brain Imaging Data Structure (BIDS) is a community-driven standard for the organization of data and metadata from a growing range of neuroscience modalities. This paper is meant as a history of how the standard has developed and grown over time. We outline the principles behind the project, the mechanisms by which it has been extended, and some of the challenges being addressed as it evolves. We also discuss the lessons learned through the project, with the aim of enabling researchers in other domains to learn from the success of BIDS.
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spelling pubmed-105161102023-09-23 The Past, Present, and Future of the Brain Imaging Data Structure (BIDS) Poldrack, Russell A. Markiewicz, Christopher J. Appelhoff, Stefan Ashar, Yoni K. Auer, Tibor Baillet, Sylvain Bansal, Shashank Beltrachini, Leandro Bénar, Christian G. Bertazzoli, Giacomo Bhogawar, Suyash Blair, Ross W. Bortoletto, Marta Boudreau, Mathieu Brooks, Teon L. Calhoun, Vince D. Castelli, Filippo Maria Clement, Patricia Cohen, Alexander L. Cohen-Adad, Julien D'Ambrosio, Sasha de Hollander, Gilles de la Iglesia-Vayá, María de la Vega, Alejandro Delorme, Arnaud Devinsky, Orrin Draschkow, Dejan Duff, Eugene Paul DuPre, Elizabeth Earl, Eric Esteban, Oscar Feingold, Franklin W. Flandin, Guillaume Galassi, Anthony Gallitto, Giuseppe Ganz, Melanie Gau, Rémi Gholam, James Ghosh, Satrajit S. Giacomel, Alessio Gillman, Ashley G. Gleeson, Padraig Gramfort, Alexandre Guay, Samuel Guidali, Giacomo Halchenko, Yaroslav O. Handwerker, Daniel A. Hardcastle, Nell Herholz, Peer Hermes, Dora Honey, Christopher J. Innis, Robert B. Ioanas, Horea-Ioan Jahn, Andrew Karakuzu, Agah Keator, David B. Kiar, Gregory Kincses, Balint Laird, Angela R. Lau, Jonathan C. Lazari, Alberto Legarreta, Jon Haitz Li, Adam Li, Xiangrui Love, Bradley C. Lu, Hanzhang Maumet, Camille Mazzamuto, Giacomo Meisler, Steven L. Mikkelsen, Mark Mutsaerts, Henk Nichols, Thomas E. Nikolaidis, Aki Nilsonne, Gustav Niso, Guiomar Norgaard, Martin Okell, Thomas W. Oostenveld, Robert Ort, Eduard Park, Patrick J. Pawlik, Mateusz Pernet, Cyril R. Pestilli, Franco Petr, Jan Phillips, Christophe Poline, Jean-Baptiste Pollonini, Luca Raamana, Pradeep Reddy Ritter, Petra Rizzo, Gaia Robbins, Kay A. Rockhill, Alexander P. Rogers, Christine Rokem, Ariel Rorden, Chris Routier, Alexandre Saborit-Torres, Jose Manuel Salo, Taylor Schirner, Michael Smith, Robert E. Spisak, Tamas Sprenger, Julia Swann, Nicole C. Szinte, Martin Takerkart, Sylvain Thirion, Bertrand Thomas, Adam G. Torabian, Sajjad Varoquaux, Gael Voytek, Bradley Welzel, Julius Wilson, Martin Yarkoni, Tal Gorgolewski, Krzysztof J. ArXiv Article The Brain Imaging Data Structure (BIDS) is a community-driven standard for the organization of data and metadata from a growing range of neuroscience modalities. This paper is meant as a history of how the standard has developed and grown over time. We outline the principles behind the project, the mechanisms by which it has been extended, and some of the challenges being addressed as it evolves. We also discuss the lessons learned through the project, with the aim of enabling researchers in other domains to learn from the success of BIDS. Cornell University 2023-09-11 /pmc/articles/PMC10516110/ /pubmed/37744469 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Poldrack, Russell A.
Markiewicz, Christopher J.
Appelhoff, Stefan
Ashar, Yoni K.
Auer, Tibor
Baillet, Sylvain
Bansal, Shashank
Beltrachini, Leandro
Bénar, Christian G.
Bertazzoli, Giacomo
Bhogawar, Suyash
Blair, Ross W.
Bortoletto, Marta
Boudreau, Mathieu
Brooks, Teon L.
Calhoun, Vince D.
Castelli, Filippo Maria
Clement, Patricia
Cohen, Alexander L.
Cohen-Adad, Julien
D'Ambrosio, Sasha
de Hollander, Gilles
de la Iglesia-Vayá, María
de la Vega, Alejandro
Delorme, Arnaud
Devinsky, Orrin
Draschkow, Dejan
Duff, Eugene Paul
DuPre, Elizabeth
Earl, Eric
Esteban, Oscar
Feingold, Franklin W.
Flandin, Guillaume
Galassi, Anthony
Gallitto, Giuseppe
Ganz, Melanie
Gau, Rémi
Gholam, James
Ghosh, Satrajit S.
Giacomel, Alessio
Gillman, Ashley G.
Gleeson, Padraig
Gramfort, Alexandre
Guay, Samuel
Guidali, Giacomo
Halchenko, Yaroslav O.
Handwerker, Daniel A.
Hardcastle, Nell
Herholz, Peer
Hermes, Dora
Honey, Christopher J.
Innis, Robert B.
Ioanas, Horea-Ioan
Jahn, Andrew
Karakuzu, Agah
Keator, David B.
Kiar, Gregory
Kincses, Balint
Laird, Angela R.
Lau, Jonathan C.
Lazari, Alberto
Legarreta, Jon Haitz
Li, Adam
Li, Xiangrui
Love, Bradley C.
Lu, Hanzhang
Maumet, Camille
Mazzamuto, Giacomo
Meisler, Steven L.
Mikkelsen, Mark
Mutsaerts, Henk
Nichols, Thomas E.
Nikolaidis, Aki
Nilsonne, Gustav
Niso, Guiomar
Norgaard, Martin
Okell, Thomas W.
Oostenveld, Robert
Ort, Eduard
Park, Patrick J.
Pawlik, Mateusz
Pernet, Cyril R.
Pestilli, Franco
Petr, Jan
Phillips, Christophe
Poline, Jean-Baptiste
Pollonini, Luca
Raamana, Pradeep Reddy
Ritter, Petra
Rizzo, Gaia
Robbins, Kay A.
Rockhill, Alexander P.
Rogers, Christine
Rokem, Ariel
Rorden, Chris
Routier, Alexandre
Saborit-Torres, Jose Manuel
Salo, Taylor
Schirner, Michael
Smith, Robert E.
Spisak, Tamas
Sprenger, Julia
Swann, Nicole C.
Szinte, Martin
Takerkart, Sylvain
Thirion, Bertrand
Thomas, Adam G.
Torabian, Sajjad
Varoquaux, Gael
Voytek, Bradley
Welzel, Julius
Wilson, Martin
Yarkoni, Tal
Gorgolewski, Krzysztof J.
The Past, Present, and Future of the Brain Imaging Data Structure (BIDS)
title The Past, Present, and Future of the Brain Imaging Data Structure (BIDS)
title_full The Past, Present, and Future of the Brain Imaging Data Structure (BIDS)
title_fullStr The Past, Present, and Future of the Brain Imaging Data Structure (BIDS)
title_full_unstemmed The Past, Present, and Future of the Brain Imaging Data Structure (BIDS)
title_short The Past, Present, and Future of the Brain Imaging Data Structure (BIDS)
title_sort past, present, and future of the brain imaging data structure (bids)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10516110/
https://www.ncbi.nlm.nih.gov/pubmed/37744469
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