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Underlying causes for prevalent false positives and false negatives in STARR-seq data

Self-transcribing active regulatory region sequencing (STARR-seq) and its variants have been widely used to characterize enhancers. However, it has been reported that up to 87% of STARR-seq peaks are located in repressive chromatin and are not functional in the tested cells. While some of the STARR-...

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Detalles Bibliográficos
Autores principales: Ni, Pengyu, Wu, Siwen, Su, Zhengchang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10516709/
https://www.ncbi.nlm.nih.gov/pubmed/37745976
http://dx.doi.org/10.1093/nargab/lqad085

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