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ToxRefDB v2.1: update to curated in vivo study data in the Toxicity Reference Database
The Toxicity Reference Database (ToxRefDB) contains in vivo study data from over 5,900 guideline or guideline-like studies for over 1,100 chemicals. The database includes information regarding study design, chemical treatment, dosing, treatment group parameters, treatment-related (significantly diff...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10518696/ https://www.ncbi.nlm.nih.gov/pubmed/37753522 http://dx.doi.org/10.3389/ftox.2023.1260305 |
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author | Feshuk, Madison Kolaczkowski, Lori Watford, Sean Paul Friedman, Katie |
author_facet | Feshuk, Madison Kolaczkowski, Lori Watford, Sean Paul Friedman, Katie |
author_sort | Feshuk, Madison |
collection | PubMed |
description | The Toxicity Reference Database (ToxRefDB) contains in vivo study data from over 5,900 guideline or guideline-like studies for over 1,100 chemicals. The database includes information regarding study design, chemical treatment, dosing, treatment group parameters, treatment-related (significantly different from control) and critical (adverse) effects, guided by a controlled effect vocabulary, as well as endpoint testing status according to health effects guideline requirements. ToxRefDB v2.1 is an update to address a compilation error found in ToxRefDB v2.0 that resulted in some effects being inadvertently omitted from the database. Though effect data has been recovered, no new studies were added. The recovered data improves the utility of ToxRefDB as a resource for curated legacy in vivo information, which enhances scientific confidence in vitro high-throughput screening of chemicals and supports retrospective and predictive toxicology applications for which outcomes in traditional regulatory toxicology studies serve as reference information. |
format | Online Article Text |
id | pubmed-10518696 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-105186962023-09-26 ToxRefDB v2.1: update to curated in vivo study data in the Toxicity Reference Database Feshuk, Madison Kolaczkowski, Lori Watford, Sean Paul Friedman, Katie Front Toxicol Toxicology The Toxicity Reference Database (ToxRefDB) contains in vivo study data from over 5,900 guideline or guideline-like studies for over 1,100 chemicals. The database includes information regarding study design, chemical treatment, dosing, treatment group parameters, treatment-related (significantly different from control) and critical (adverse) effects, guided by a controlled effect vocabulary, as well as endpoint testing status according to health effects guideline requirements. ToxRefDB v2.1 is an update to address a compilation error found in ToxRefDB v2.0 that resulted in some effects being inadvertently omitted from the database. Though effect data has been recovered, no new studies were added. The recovered data improves the utility of ToxRefDB as a resource for curated legacy in vivo information, which enhances scientific confidence in vitro high-throughput screening of chemicals and supports retrospective and predictive toxicology applications for which outcomes in traditional regulatory toxicology studies serve as reference information. Frontiers Media S.A. 2023-09-11 /pmc/articles/PMC10518696/ /pubmed/37753522 http://dx.doi.org/10.3389/ftox.2023.1260305 Text en Copyright © 2023 Feshuk, Kolaczkowski, Watford and Paul Friedman. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Toxicology Feshuk, Madison Kolaczkowski, Lori Watford, Sean Paul Friedman, Katie ToxRefDB v2.1: update to curated in vivo study data in the Toxicity Reference Database |
title | ToxRefDB v2.1: update to curated in vivo study data in the Toxicity Reference Database |
title_full | ToxRefDB v2.1: update to curated in vivo study data in the Toxicity Reference Database |
title_fullStr | ToxRefDB v2.1: update to curated in vivo study data in the Toxicity Reference Database |
title_full_unstemmed | ToxRefDB v2.1: update to curated in vivo study data in the Toxicity Reference Database |
title_short | ToxRefDB v2.1: update to curated in vivo study data in the Toxicity Reference Database |
title_sort | toxrefdb v2.1: update to curated in vivo study data in the toxicity reference database |
topic | Toxicology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10518696/ https://www.ncbi.nlm.nih.gov/pubmed/37753522 http://dx.doi.org/10.3389/ftox.2023.1260305 |
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