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Genealogical inference and more flexible sequence clustering using iterative-PopPUNK

Bacterial genome data are accumulating at an unprecedented speed due to the routine use of sequencing in clinical diagnoses, public health surveillance, and population genetics studies. Genealogical reconstruction is fundamental to many of these uses; however, inferring genealogy from large-scale ge...

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Detalles Bibliográficos
Autores principales: Zhao, Bin, Lees, John A., Wu, Hongjin, Yang, Chao, Falush, Daniel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10519404/
https://www.ncbi.nlm.nih.gov/pubmed/37253539
http://dx.doi.org/10.1101/gr.277395.122