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Integrative GWAS and co-localisation analysis suggests novel genes associated with age-related multimorbidity
Advancing age is the greatest risk factor for developing multiple age-related diseases. Therapeutic approaches targeting the underlying pathways of ageing, rather than individual diseases, may be an effective way to treat and prevent age-related morbidity while reducing the burden of polypharmacy. W...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10520009/ https://www.ncbi.nlm.nih.gov/pubmed/37749083 http://dx.doi.org/10.1038/s41597-023-02513-4 |
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author | West, Clare E. Karim, Mohd Falaguera, Maria J. Speidel, Leo Green, Charlotte J. Logie, Lisa Schwartzentruber, Jeremy Ochoa, David Lord, Janet M. Ferguson, Michael A. J. Bountra, Chas Wilkinson, Graeme F. Vaughan, Beverley Leach, Andrew R. Dunham, Ian Marsden, Brian D. |
author_facet | West, Clare E. Karim, Mohd Falaguera, Maria J. Speidel, Leo Green, Charlotte J. Logie, Lisa Schwartzentruber, Jeremy Ochoa, David Lord, Janet M. Ferguson, Michael A. J. Bountra, Chas Wilkinson, Graeme F. Vaughan, Beverley Leach, Andrew R. Dunham, Ian Marsden, Brian D. |
author_sort | West, Clare E. |
collection | PubMed |
description | Advancing age is the greatest risk factor for developing multiple age-related diseases. Therapeutic approaches targeting the underlying pathways of ageing, rather than individual diseases, may be an effective way to treat and prevent age-related morbidity while reducing the burden of polypharmacy. We harness the Open Targets Genetics Portal to perform a systematic analysis of nearly 1,400 genome-wide association studies (GWAS) mapped to 34 age-related diseases and traits, identifying genetic signals that are shared between two or more of these traits. Using locus-to-gene (L2G) mapping, we identify 995 targets with shared genetic links to age-related diseases and traits, which are enriched in mechanisms of ageing and include known ageing and longevity-related genes. Of these 995 genes, 128 are the target of an approved or investigational drug, 526 have experimental evidence of binding pockets or are predicted to be tractable, and 341 have no existing tractability evidence, representing underexplored genes which may reveal novel biological insights and therapeutic opportunities. We present these candidate targets for exploration and prioritisation in a web application. |
format | Online Article Text |
id | pubmed-10520009 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-105200092023-09-27 Integrative GWAS and co-localisation analysis suggests novel genes associated with age-related multimorbidity West, Clare E. Karim, Mohd Falaguera, Maria J. Speidel, Leo Green, Charlotte J. Logie, Lisa Schwartzentruber, Jeremy Ochoa, David Lord, Janet M. Ferguson, Michael A. J. Bountra, Chas Wilkinson, Graeme F. Vaughan, Beverley Leach, Andrew R. Dunham, Ian Marsden, Brian D. Sci Data Analysis Advancing age is the greatest risk factor for developing multiple age-related diseases. Therapeutic approaches targeting the underlying pathways of ageing, rather than individual diseases, may be an effective way to treat and prevent age-related morbidity while reducing the burden of polypharmacy. We harness the Open Targets Genetics Portal to perform a systematic analysis of nearly 1,400 genome-wide association studies (GWAS) mapped to 34 age-related diseases and traits, identifying genetic signals that are shared between two or more of these traits. Using locus-to-gene (L2G) mapping, we identify 995 targets with shared genetic links to age-related diseases and traits, which are enriched in mechanisms of ageing and include known ageing and longevity-related genes. Of these 995 genes, 128 are the target of an approved or investigational drug, 526 have experimental evidence of binding pockets or are predicted to be tractable, and 341 have no existing tractability evidence, representing underexplored genes which may reveal novel biological insights and therapeutic opportunities. We present these candidate targets for exploration and prioritisation in a web application. Nature Publishing Group UK 2023-09-25 /pmc/articles/PMC10520009/ /pubmed/37749083 http://dx.doi.org/10.1038/s41597-023-02513-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Analysis West, Clare E. Karim, Mohd Falaguera, Maria J. Speidel, Leo Green, Charlotte J. Logie, Lisa Schwartzentruber, Jeremy Ochoa, David Lord, Janet M. Ferguson, Michael A. J. Bountra, Chas Wilkinson, Graeme F. Vaughan, Beverley Leach, Andrew R. Dunham, Ian Marsden, Brian D. Integrative GWAS and co-localisation analysis suggests novel genes associated with age-related multimorbidity |
title | Integrative GWAS and co-localisation analysis suggests novel genes associated with age-related multimorbidity |
title_full | Integrative GWAS and co-localisation analysis suggests novel genes associated with age-related multimorbidity |
title_fullStr | Integrative GWAS and co-localisation analysis suggests novel genes associated with age-related multimorbidity |
title_full_unstemmed | Integrative GWAS and co-localisation analysis suggests novel genes associated with age-related multimorbidity |
title_short | Integrative GWAS and co-localisation analysis suggests novel genes associated with age-related multimorbidity |
title_sort | integrative gwas and co-localisation analysis suggests novel genes associated with age-related multimorbidity |
topic | Analysis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10520009/ https://www.ncbi.nlm.nih.gov/pubmed/37749083 http://dx.doi.org/10.1038/s41597-023-02513-4 |
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