Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data

This protocol demonstrates how a fragmented reference genome and low-coverage sequencing data can be efficiently utilized for population genetic analyses of a species with highly reduced genetic diversity. Focusing on endangered Saimaa ringed seals, we detail the steps for data preparation and conve...

Descripción completa

Detalles Bibliográficos
Autores principales: Olkkonen, Emmi, Löytynoja, Ari
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Protocol
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10520563/
https://www.ncbi.nlm.nih.gov/pubmed/37740912
http://dx.doi.org/10.1016/j.xpro.2023.102567

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10520563/
https://www.ncbi.nlm.nih.gov/pubmed/37740912
http://dx.doi.org/10.1016/j.xpro.2023.102567

Ejemplares similares