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A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra

Objective and Impact Statement. Distinguishing tumors from normal tissues is vital in the intraoperative diagnosis and pathological examination. In this work, we propose to utilize Raman spectroscopy as a novel modality in surgery to detect colorectal cancer tissues. Introduction. Raman spectra can...

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Autores principales: Cao, Zheng, Pan, Xiang, Yu, Hongyun, Hua, Shiyuan, Wang, Da, Chen, Danny Z., Zhou, Min, Wu, Jian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AAAS 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10521640/
https://www.ncbi.nlm.nih.gov/pubmed/37850174
http://dx.doi.org/10.34133/2022/9872028
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author Cao, Zheng
Pan, Xiang
Yu, Hongyun
Hua, Shiyuan
Wang, Da
Chen, Danny Z.
Zhou, Min
Wu, Jian
author_facet Cao, Zheng
Pan, Xiang
Yu, Hongyun
Hua, Shiyuan
Wang, Da
Chen, Danny Z.
Zhou, Min
Wu, Jian
author_sort Cao, Zheng
collection PubMed
description Objective and Impact Statement. Distinguishing tumors from normal tissues is vital in the intraoperative diagnosis and pathological examination. In this work, we propose to utilize Raman spectroscopy as a novel modality in surgery to detect colorectal cancer tissues. Introduction. Raman spectra can reflect the substance components of the target tissues. However, the feature peak is slight and hard to detect due to environmental noise. Collecting a high-quality Raman spectroscopy dataset and developing effective deep learning detection methods are possibly viable approaches. Methods. First, we collect a large Raman spectroscopy dataset from 26 colorectal cancer patients with the Raman shift ranging from 385 to 1545 cm [Formula: see text]. Second, a one-dimensional residual convolutional neural network (1D-ResNet) architecture is designed to classify the tumor tissues of colorectal cancer. Third, we visualize and interpret the fingerprint peaks found by our deep learning model. Results. Experimental results show that our deep learning method achieves 98.5% accuracy in the detection of colorectal cancer and outperforms traditional methods. Conclusion. Overall, Raman spectra are a novel modality for clinical detection of colorectal cancer. Our proposed ensemble 1D-ResNet could effectively classify the Raman spectra obtained from colorectal tumor tissues or normal tissues.
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spelling pubmed-105216402023-10-17 A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra Cao, Zheng Pan, Xiang Yu, Hongyun Hua, Shiyuan Wang, Da Chen, Danny Z. Zhou, Min Wu, Jian BME Front Research Article Objective and Impact Statement. Distinguishing tumors from normal tissues is vital in the intraoperative diagnosis and pathological examination. In this work, we propose to utilize Raman spectroscopy as a novel modality in surgery to detect colorectal cancer tissues. Introduction. Raman spectra can reflect the substance components of the target tissues. However, the feature peak is slight and hard to detect due to environmental noise. Collecting a high-quality Raman spectroscopy dataset and developing effective deep learning detection methods are possibly viable approaches. Methods. First, we collect a large Raman spectroscopy dataset from 26 colorectal cancer patients with the Raman shift ranging from 385 to 1545 cm [Formula: see text]. Second, a one-dimensional residual convolutional neural network (1D-ResNet) architecture is designed to classify the tumor tissues of colorectal cancer. Third, we visualize and interpret the fingerprint peaks found by our deep learning model. Results. Experimental results show that our deep learning method achieves 98.5% accuracy in the detection of colorectal cancer and outperforms traditional methods. Conclusion. Overall, Raman spectra are a novel modality for clinical detection of colorectal cancer. Our proposed ensemble 1D-ResNet could effectively classify the Raman spectra obtained from colorectal tumor tissues or normal tissues. AAAS 2022-04-07 /pmc/articles/PMC10521640/ /pubmed/37850174 http://dx.doi.org/10.34133/2022/9872028 Text en Copyright © 2022 Zheng Cao et al. https://creativecommons.org/licenses/by/4.0/Exclusive Licensee Suzhou Institute of Biomedical Engineering and Technology, CAS. Distributed under a Creative Commons Attribution License (CC BY 4.0). (https://creativecommons.org/licenses/by/4.0/)
spellingShingle Research Article
Cao, Zheng
Pan, Xiang
Yu, Hongyun
Hua, Shiyuan
Wang, Da
Chen, Danny Z.
Zhou, Min
Wu, Jian
A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra
title A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra
title_full A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra
title_fullStr A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra
title_full_unstemmed A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra
title_short A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra
title_sort deep learning approach for detecting colorectal cancer via raman spectra
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10521640/
https://www.ncbi.nlm.nih.gov/pubmed/37850174
http://dx.doi.org/10.34133/2022/9872028
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