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A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra
Objective and Impact Statement. Distinguishing tumors from normal tissues is vital in the intraoperative diagnosis and pathological examination. In this work, we propose to utilize Raman spectroscopy as a novel modality in surgery to detect colorectal cancer tissues. Introduction. Raman spectra can...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AAAS
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10521640/ https://www.ncbi.nlm.nih.gov/pubmed/37850174 http://dx.doi.org/10.34133/2022/9872028 |
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author | Cao, Zheng Pan, Xiang Yu, Hongyun Hua, Shiyuan Wang, Da Chen, Danny Z. Zhou, Min Wu, Jian |
author_facet | Cao, Zheng Pan, Xiang Yu, Hongyun Hua, Shiyuan Wang, Da Chen, Danny Z. Zhou, Min Wu, Jian |
author_sort | Cao, Zheng |
collection | PubMed |
description | Objective and Impact Statement. Distinguishing tumors from normal tissues is vital in the intraoperative diagnosis and pathological examination. In this work, we propose to utilize Raman spectroscopy as a novel modality in surgery to detect colorectal cancer tissues. Introduction. Raman spectra can reflect the substance components of the target tissues. However, the feature peak is slight and hard to detect due to environmental noise. Collecting a high-quality Raman spectroscopy dataset and developing effective deep learning detection methods are possibly viable approaches. Methods. First, we collect a large Raman spectroscopy dataset from 26 colorectal cancer patients with the Raman shift ranging from 385 to 1545 cm [Formula: see text]. Second, a one-dimensional residual convolutional neural network (1D-ResNet) architecture is designed to classify the tumor tissues of colorectal cancer. Third, we visualize and interpret the fingerprint peaks found by our deep learning model. Results. Experimental results show that our deep learning method achieves 98.5% accuracy in the detection of colorectal cancer and outperforms traditional methods. Conclusion. Overall, Raman spectra are a novel modality for clinical detection of colorectal cancer. Our proposed ensemble 1D-ResNet could effectively classify the Raman spectra obtained from colorectal tumor tissues or normal tissues. |
format | Online Article Text |
id | pubmed-10521640 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | AAAS |
record_format | MEDLINE/PubMed |
spelling | pubmed-105216402023-10-17 A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra Cao, Zheng Pan, Xiang Yu, Hongyun Hua, Shiyuan Wang, Da Chen, Danny Z. Zhou, Min Wu, Jian BME Front Research Article Objective and Impact Statement. Distinguishing tumors from normal tissues is vital in the intraoperative diagnosis and pathological examination. In this work, we propose to utilize Raman spectroscopy as a novel modality in surgery to detect colorectal cancer tissues. Introduction. Raman spectra can reflect the substance components of the target tissues. However, the feature peak is slight and hard to detect due to environmental noise. Collecting a high-quality Raman spectroscopy dataset and developing effective deep learning detection methods are possibly viable approaches. Methods. First, we collect a large Raman spectroscopy dataset from 26 colorectal cancer patients with the Raman shift ranging from 385 to 1545 cm [Formula: see text]. Second, a one-dimensional residual convolutional neural network (1D-ResNet) architecture is designed to classify the tumor tissues of colorectal cancer. Third, we visualize and interpret the fingerprint peaks found by our deep learning model. Results. Experimental results show that our deep learning method achieves 98.5% accuracy in the detection of colorectal cancer and outperforms traditional methods. Conclusion. Overall, Raman spectra are a novel modality for clinical detection of colorectal cancer. Our proposed ensemble 1D-ResNet could effectively classify the Raman spectra obtained from colorectal tumor tissues or normal tissues. AAAS 2022-04-07 /pmc/articles/PMC10521640/ /pubmed/37850174 http://dx.doi.org/10.34133/2022/9872028 Text en Copyright © 2022 Zheng Cao et al. https://creativecommons.org/licenses/by/4.0/Exclusive Licensee Suzhou Institute of Biomedical Engineering and Technology, CAS. Distributed under a Creative Commons Attribution License (CC BY 4.0). (https://creativecommons.org/licenses/by/4.0/) |
spellingShingle | Research Article Cao, Zheng Pan, Xiang Yu, Hongyun Hua, Shiyuan Wang, Da Chen, Danny Z. Zhou, Min Wu, Jian A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra |
title | A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra |
title_full | A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra |
title_fullStr | A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra |
title_full_unstemmed | A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra |
title_short | A Deep Learning Approach for Detecting Colorectal Cancer via Raman Spectra |
title_sort | deep learning approach for detecting colorectal cancer via raman spectra |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10521640/ https://www.ncbi.nlm.nih.gov/pubmed/37850174 http://dx.doi.org/10.34133/2022/9872028 |
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