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Automated Segmentation and Connectivity Analysis for Normal Pressure Hydrocephalus

Objective and Impact Statement. We propose an automated method of predicting Normal Pressure Hydrocephalus (NPH) from CT scans. A deep convolutional network segments regions of interest from the scans. These regions are then combined with MRI information to predict NPH. To our knowledge, this is the...

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Autores principales: Zhang, Angela, Khan, Amil, Majeti, Saisidharth, Pham, Judy, Nguyen, Christopher, Tran, Peter, Iyer, Vikram, Shelat, Ashutosh, Chen, Jefferson, Manjunath, B. S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AAAS 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10521674/
https://www.ncbi.nlm.nih.gov/pubmed/37850185
http://dx.doi.org/10.34133/2022/9783128
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author Zhang, Angela
Khan, Amil
Majeti, Saisidharth
Pham, Judy
Nguyen, Christopher
Tran, Peter
Iyer, Vikram
Shelat, Ashutosh
Chen, Jefferson
Manjunath, B. S.
author_facet Zhang, Angela
Khan, Amil
Majeti, Saisidharth
Pham, Judy
Nguyen, Christopher
Tran, Peter
Iyer, Vikram
Shelat, Ashutosh
Chen, Jefferson
Manjunath, B. S.
author_sort Zhang, Angela
collection PubMed
description Objective and Impact Statement. We propose an automated method of predicting Normal Pressure Hydrocephalus (NPH) from CT scans. A deep convolutional network segments regions of interest from the scans. These regions are then combined with MRI information to predict NPH. To our knowledge, this is the first method which automatically predicts NPH from CT scans and incorporates diffusion tractography information for prediction. Introduction. Due to their low cost and high versatility, CT scans are often used in NPH diagnosis. No well-defined and effective protocol currently exists for analysis of CT scans for NPH. Evans’ index, an approximation of the ventricle to brain volume using one 2D image slice, has been proposed but is not robust. The proposed approach is an effective way to quantify regions of interest and offers a computational method for predicting NPH. Methods. We propose a novel method to predict NPH by combining regions of interest segmented from CT scans with connectome data to compute features which capture the impact of enlarged ventricles by excluding fiber tracts passing through these regions. The segmentation and network features are used to train a model for NPH prediction. Results. Our method outperforms the current state-of-the-art by 9 precision points and 29 recall points. Our segmentation model outperforms the current state-of-the-art in segmenting the ventricle, gray-white matter, and subarachnoid space in CT scans. Conclusion. Our experimental results demonstrate that fast and accurate volumetric segmentation of CT brain scans can help improve the NPH diagnosis process, and network properties can increase NPH prediction accuracy.
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spelling pubmed-105216742023-10-17 Automated Segmentation and Connectivity Analysis for Normal Pressure Hydrocephalus Zhang, Angela Khan, Amil Majeti, Saisidharth Pham, Judy Nguyen, Christopher Tran, Peter Iyer, Vikram Shelat, Ashutosh Chen, Jefferson Manjunath, B. S. BME Front Research Article Objective and Impact Statement. We propose an automated method of predicting Normal Pressure Hydrocephalus (NPH) from CT scans. A deep convolutional network segments regions of interest from the scans. These regions are then combined with MRI information to predict NPH. To our knowledge, this is the first method which automatically predicts NPH from CT scans and incorporates diffusion tractography information for prediction. Introduction. Due to their low cost and high versatility, CT scans are often used in NPH diagnosis. No well-defined and effective protocol currently exists for analysis of CT scans for NPH. Evans’ index, an approximation of the ventricle to brain volume using one 2D image slice, has been proposed but is not robust. The proposed approach is an effective way to quantify regions of interest and offers a computational method for predicting NPH. Methods. We propose a novel method to predict NPH by combining regions of interest segmented from CT scans with connectome data to compute features which capture the impact of enlarged ventricles by excluding fiber tracts passing through these regions. The segmentation and network features are used to train a model for NPH prediction. Results. Our method outperforms the current state-of-the-art by 9 precision points and 29 recall points. Our segmentation model outperforms the current state-of-the-art in segmenting the ventricle, gray-white matter, and subarachnoid space in CT scans. Conclusion. Our experimental results demonstrate that fast and accurate volumetric segmentation of CT brain scans can help improve the NPH diagnosis process, and network properties can increase NPH prediction accuracy. AAAS 2022-01-09 /pmc/articles/PMC10521674/ /pubmed/37850185 http://dx.doi.org/10.34133/2022/9783128 Text en Copyright © 2022 Angela Zhang et al. https://creativecommons.org/licenses/by/4.0/Exclusive Licensee Suzhou Institute of Biomedical Engineering and Technology, CAS. Distributed under a Creative Commons Attribution License (CC BY 4.0). (https://creativecommons.org/licenses/by/4.0/)
spellingShingle Research Article
Zhang, Angela
Khan, Amil
Majeti, Saisidharth
Pham, Judy
Nguyen, Christopher
Tran, Peter
Iyer, Vikram
Shelat, Ashutosh
Chen, Jefferson
Manjunath, B. S.
Automated Segmentation and Connectivity Analysis for Normal Pressure Hydrocephalus
title Automated Segmentation and Connectivity Analysis for Normal Pressure Hydrocephalus
title_full Automated Segmentation and Connectivity Analysis for Normal Pressure Hydrocephalus
title_fullStr Automated Segmentation and Connectivity Analysis for Normal Pressure Hydrocephalus
title_full_unstemmed Automated Segmentation and Connectivity Analysis for Normal Pressure Hydrocephalus
title_short Automated Segmentation and Connectivity Analysis for Normal Pressure Hydrocephalus
title_sort automated segmentation and connectivity analysis for normal pressure hydrocephalus
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10521674/
https://www.ncbi.nlm.nih.gov/pubmed/37850185
http://dx.doi.org/10.34133/2022/9783128
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