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Meta-Analysis of the Expansion in the Field of Structural Biology of ABC Transporters

ABC transporters are molecular machines which power the solute transport using ATP hydrolysis. The structural biology of ABC transporters has been exploding for the last few years, and this study explores timelines and trends for various attributes such as structural tools, resolution, fold, sources...

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Autores principales: Kim, Soomi, Bajaj, Teena, Chabon, Cole, Tablante, Eric, Kulchinskaya, Tatyana, Moon, Tae Seok, Bajaj, Ruchika
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AAAS 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10521687/
https://www.ncbi.nlm.nih.gov/pubmed/37850125
http://dx.doi.org/10.34133/2022/9806979
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author Kim, Soomi
Bajaj, Teena
Chabon, Cole
Tablante, Eric
Kulchinskaya, Tatyana
Moon, Tae Seok
Bajaj, Ruchika
author_facet Kim, Soomi
Bajaj, Teena
Chabon, Cole
Tablante, Eric
Kulchinskaya, Tatyana
Moon, Tae Seok
Bajaj, Ruchika
author_sort Kim, Soomi
collection PubMed
description ABC transporters are molecular machines which power the solute transport using ATP hydrolysis. The structural biology of ABC transporters has been exploding for the last few years, and this study explores timelines and trends for various attributes such as structural tools, resolution, fold, sources, and group leaders. This study also evidences the significance of mammalian expression systems, advancements in structural biology tools, and the developing interest of group leaders across the world in the remarkably progressing field. The field started in 2002 and bloomed in 2016, and COVID years were really productive to the field. Specifically, the study explores 337 structures of 58 unique ABC transporters deposited in the PDB database from which P-glycoprotein has the largest number of structures. Approximately, 62% of total structures are determined at the resolution of 3-4 Å and 53% of structures belong to fold IV type. With progressive advancements in the field, the field is shifting from prokaryotic to eukaryotic sources and X-ray crystallography to cryoelectron microscopy. In the nutshell, this study uniquely provides the detailed snapshot of the field of structural biology of ABC transporters with real-time data.
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spelling pubmed-105216872023-10-17 Meta-Analysis of the Expansion in the Field of Structural Biology of ABC Transporters Kim, Soomi Bajaj, Teena Chabon, Cole Tablante, Eric Kulchinskaya, Tatyana Moon, Tae Seok Bajaj, Ruchika Biodes Res Review Article ABC transporters are molecular machines which power the solute transport using ATP hydrolysis. The structural biology of ABC transporters has been exploding for the last few years, and this study explores timelines and trends for various attributes such as structural tools, resolution, fold, sources, and group leaders. This study also evidences the significance of mammalian expression systems, advancements in structural biology tools, and the developing interest of group leaders across the world in the remarkably progressing field. The field started in 2002 and bloomed in 2016, and COVID years were really productive to the field. Specifically, the study explores 337 structures of 58 unique ABC transporters deposited in the PDB database from which P-glycoprotein has the largest number of structures. Approximately, 62% of total structures are determined at the resolution of 3-4 Å and 53% of structures belong to fold IV type. With progressive advancements in the field, the field is shifting from prokaryotic to eukaryotic sources and X-ray crystallography to cryoelectron microscopy. In the nutshell, this study uniquely provides the detailed snapshot of the field of structural biology of ABC transporters with real-time data. AAAS 2022-09-08 /pmc/articles/PMC10521687/ /pubmed/37850125 http://dx.doi.org/10.34133/2022/9806979 Text en Copyright © 2022 Soomi Kim et al. https://creativecommons.org/licenses/by/4.0/Exclusive Licensee Nanjing Agricultural University. Distributed under a Creative Commons Attribution License (CC BY 4.0). (https://creativecommons.org/licenses/by/4.0/)
spellingShingle Review Article
Kim, Soomi
Bajaj, Teena
Chabon, Cole
Tablante, Eric
Kulchinskaya, Tatyana
Moon, Tae Seok
Bajaj, Ruchika
Meta-Analysis of the Expansion in the Field of Structural Biology of ABC Transporters
title Meta-Analysis of the Expansion in the Field of Structural Biology of ABC Transporters
title_full Meta-Analysis of the Expansion in the Field of Structural Biology of ABC Transporters
title_fullStr Meta-Analysis of the Expansion in the Field of Structural Biology of ABC Transporters
title_full_unstemmed Meta-Analysis of the Expansion in the Field of Structural Biology of ABC Transporters
title_short Meta-Analysis of the Expansion in the Field of Structural Biology of ABC Transporters
title_sort meta-analysis of the expansion in the field of structural biology of abc transporters
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10521687/
https://www.ncbi.nlm.nih.gov/pubmed/37850125
http://dx.doi.org/10.34133/2022/9806979
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