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Protein Identification and Quantification Using Porous Silicon Arrays, Optical Measurements, and Machine Learning
We report a versatile platform based on an array of porous silicon (PSi) thin films that can identify analytes based on their physical and chemical properties without the use of specific capture agents. The ability of this system to reproducibly classify, quantify, and discriminate three proteins se...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10526835/ https://www.ncbi.nlm.nih.gov/pubmed/37754113 http://dx.doi.org/10.3390/bios13090879 |
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author | Ward, Simon J. Cao, Tengfei Zhou, Xiang Chang, Catie Weiss, Sharon M. |
author_facet | Ward, Simon J. Cao, Tengfei Zhou, Xiang Chang, Catie Weiss, Sharon M. |
author_sort | Ward, Simon J. |
collection | PubMed |
description | We report a versatile platform based on an array of porous silicon (PSi) thin films that can identify analytes based on their physical and chemical properties without the use of specific capture agents. The ability of this system to reproducibly classify, quantify, and discriminate three proteins separately is demonstrated by probing the reflectance of PSi array elements with a unique combination of pore size and buffer pH, and by analyzing the optical signals using machine learning. Protein identification and discrimination are reported over a concentration range of two orders of magnitude. This work represents a significant first step towards a low-cost, simple, versatile, and robust sensor platform that is able to detect biomolecules without the added expense and limitations of using capture agents. |
format | Online Article Text |
id | pubmed-10526835 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-105268352023-09-28 Protein Identification and Quantification Using Porous Silicon Arrays, Optical Measurements, and Machine Learning Ward, Simon J. Cao, Tengfei Zhou, Xiang Chang, Catie Weiss, Sharon M. Biosensors (Basel) Article We report a versatile platform based on an array of porous silicon (PSi) thin films that can identify analytes based on their physical and chemical properties without the use of specific capture agents. The ability of this system to reproducibly classify, quantify, and discriminate three proteins separately is demonstrated by probing the reflectance of PSi array elements with a unique combination of pore size and buffer pH, and by analyzing the optical signals using machine learning. Protein identification and discrimination are reported over a concentration range of two orders of magnitude. This work represents a significant first step towards a low-cost, simple, versatile, and robust sensor platform that is able to detect biomolecules without the added expense and limitations of using capture agents. MDPI 2023-09-09 /pmc/articles/PMC10526835/ /pubmed/37754113 http://dx.doi.org/10.3390/bios13090879 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Ward, Simon J. Cao, Tengfei Zhou, Xiang Chang, Catie Weiss, Sharon M. Protein Identification and Quantification Using Porous Silicon Arrays, Optical Measurements, and Machine Learning |
title | Protein Identification and Quantification Using Porous Silicon Arrays, Optical Measurements, and Machine Learning |
title_full | Protein Identification and Quantification Using Porous Silicon Arrays, Optical Measurements, and Machine Learning |
title_fullStr | Protein Identification and Quantification Using Porous Silicon Arrays, Optical Measurements, and Machine Learning |
title_full_unstemmed | Protein Identification and Quantification Using Porous Silicon Arrays, Optical Measurements, and Machine Learning |
title_short | Protein Identification and Quantification Using Porous Silicon Arrays, Optical Measurements, and Machine Learning |
title_sort | protein identification and quantification using porous silicon arrays, optical measurements, and machine learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10526835/ https://www.ncbi.nlm.nih.gov/pubmed/37754113 http://dx.doi.org/10.3390/bios13090879 |
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