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Transformer-Based Multi-Modal Data Fusion Method for COPD Classification and Physiological and Biochemical Indicators Identification

As the number of modalities in biomedical data continues to increase, the significance of multi-modal data becomes evident in capturing complex relationships between biological processes, thereby complementing disease classification. However, the current multi-modal fusion methods for biomedical dat...

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Detalles Bibliográficos
Autores principales: Xie, Weidong, Fang, Yushan, Yang, Guicheng, Yu, Kun, Li, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10527317/
https://www.ncbi.nlm.nih.gov/pubmed/37759791
http://dx.doi.org/10.3390/biom13091391
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author Xie, Weidong
Fang, Yushan
Yang, Guicheng
Yu, Kun
Li, Wei
author_facet Xie, Weidong
Fang, Yushan
Yang, Guicheng
Yu, Kun
Li, Wei
author_sort Xie, Weidong
collection PubMed
description As the number of modalities in biomedical data continues to increase, the significance of multi-modal data becomes evident in capturing complex relationships between biological processes, thereby complementing disease classification. However, the current multi-modal fusion methods for biomedical data require more effective exploitation of intra- and inter-modal interactions, and the application of powerful fusion methods to biomedical data is relatively rare. In this paper, we propose a novel multi-modal data fusion method that addresses these limitations. Our proposed method utilizes a graph neural network and a 3D convolutional network to identify intra-modal relationships. By doing so, we can extract meaningful features from each modality, preserving crucial information. To fuse information from different modalities, we employ the Low-rank Multi-modal Fusion method, which effectively integrates multiple modalities while reducing noise and redundancy. Additionally, our method incorporates the Cross-modal Transformer to automatically learn relationships between different modalities, facilitating enhanced information exchange and representation. We validate the effectiveness of our proposed method using lung CT imaging data and physiological and biochemical data obtained from patients diagnosed with Chronic Obstructive Pulmonary Disease (COPD). Our method demonstrates superior performance compared to various fusion methods and their variants in terms of disease classification accuracy.
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spelling pubmed-105273172023-09-28 Transformer-Based Multi-Modal Data Fusion Method for COPD Classification and Physiological and Biochemical Indicators Identification Xie, Weidong Fang, Yushan Yang, Guicheng Yu, Kun Li, Wei Biomolecules Article As the number of modalities in biomedical data continues to increase, the significance of multi-modal data becomes evident in capturing complex relationships between biological processes, thereby complementing disease classification. However, the current multi-modal fusion methods for biomedical data require more effective exploitation of intra- and inter-modal interactions, and the application of powerful fusion methods to biomedical data is relatively rare. In this paper, we propose a novel multi-modal data fusion method that addresses these limitations. Our proposed method utilizes a graph neural network and a 3D convolutional network to identify intra-modal relationships. By doing so, we can extract meaningful features from each modality, preserving crucial information. To fuse information from different modalities, we employ the Low-rank Multi-modal Fusion method, which effectively integrates multiple modalities while reducing noise and redundancy. Additionally, our method incorporates the Cross-modal Transformer to automatically learn relationships between different modalities, facilitating enhanced information exchange and representation. We validate the effectiveness of our proposed method using lung CT imaging data and physiological and biochemical data obtained from patients diagnosed with Chronic Obstructive Pulmonary Disease (COPD). Our method demonstrates superior performance compared to various fusion methods and their variants in terms of disease classification accuracy. MDPI 2023-09-15 /pmc/articles/PMC10527317/ /pubmed/37759791 http://dx.doi.org/10.3390/biom13091391 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Xie, Weidong
Fang, Yushan
Yang, Guicheng
Yu, Kun
Li, Wei
Transformer-Based Multi-Modal Data Fusion Method for COPD Classification and Physiological and Biochemical Indicators Identification
title Transformer-Based Multi-Modal Data Fusion Method for COPD Classification and Physiological and Biochemical Indicators Identification
title_full Transformer-Based Multi-Modal Data Fusion Method for COPD Classification and Physiological and Biochemical Indicators Identification
title_fullStr Transformer-Based Multi-Modal Data Fusion Method for COPD Classification and Physiological and Biochemical Indicators Identification
title_full_unstemmed Transformer-Based Multi-Modal Data Fusion Method for COPD Classification and Physiological and Biochemical Indicators Identification
title_short Transformer-Based Multi-Modal Data Fusion Method for COPD Classification and Physiological and Biochemical Indicators Identification
title_sort transformer-based multi-modal data fusion method for copd classification and physiological and biochemical indicators identification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10527317/
https://www.ncbi.nlm.nih.gov/pubmed/37759791
http://dx.doi.org/10.3390/biom13091391
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