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The differentially expressed proteins related to clinical viral encephalitis revealed by proteomics
To screen out the prospective biomarkers of viral encephalitis (VE), analyze the biological process and signaling pathways involved by differentially expressed proteins (DEPs). A total of 11 cerebrospinal fluid (CSF) samples with VE and 5 with non‐nervous system infection were used to perform label‐...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10528792/ https://www.ncbi.nlm.nih.gov/pubmed/37786892 http://dx.doi.org/10.1002/ibra.12036 |
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author | Wang, Qian Yan, Shan‐Shan Zhang, Jun‐Yan Du, Ruo‐Lan Xue, Lu‐Lu Li, Juan Yu, Chang‐Yin |
author_facet | Wang, Qian Yan, Shan‐Shan Zhang, Jun‐Yan Du, Ruo‐Lan Xue, Lu‐Lu Li, Juan Yu, Chang‐Yin |
author_sort | Wang, Qian |
collection | PubMed |
description | To screen out the prospective biomarkers of viral encephalitis (VE), analyze the biological process and signaling pathways involved by differentially expressed proteins (DEPs). A total of 11 cerebrospinal fluid (CSF) samples with VE and 5 with non‐nervous system infection were used to perform label‐free proteomic techniques. Then, the bioinformatic analysis of DEPs was applied by Interproscan software. Moreover, 73 CSF samples in the VE group and 53 in the control group were used to verify the changes of some DEPs by enzyme‐linked immunosorbent assay (ELISA). Thirty‐nine DEPs were identified, including 18 upregulated DEPs and 21 downregulated DEPs. DEPs were mainly enriched in cell adhesion molecules by Kyoto Encyclopedia of Genes and Genomes analysis pathway analysis. The DEPs related to axon tissue were obviously downregulated and the most significant downregulated proteins were neurexin 3, neurofascin, and neuroligin 2 (NLGN2). Moreover, the protein expression of NLGN2 in the VE group was significantly higher than that in the control group by ELISA. The correlation analysis of NLGN2 in the VE group revealed that there was a weak positive correlation with CSF protein and a weak negative correlation with CSF chloride. The clinical VE may be closely related to NLGN2 and the cell adhesion molecule pathway. |
format | Online Article Text |
id | pubmed-10528792 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-105287922023-10-02 The differentially expressed proteins related to clinical viral encephalitis revealed by proteomics Wang, Qian Yan, Shan‐Shan Zhang, Jun‐Yan Du, Ruo‐Lan Xue, Lu‐Lu Li, Juan Yu, Chang‐Yin Ibrain Original Articles To screen out the prospective biomarkers of viral encephalitis (VE), analyze the biological process and signaling pathways involved by differentially expressed proteins (DEPs). A total of 11 cerebrospinal fluid (CSF) samples with VE and 5 with non‐nervous system infection were used to perform label‐free proteomic techniques. Then, the bioinformatic analysis of DEPs was applied by Interproscan software. Moreover, 73 CSF samples in the VE group and 53 in the control group were used to verify the changes of some DEPs by enzyme‐linked immunosorbent assay (ELISA). Thirty‐nine DEPs were identified, including 18 upregulated DEPs and 21 downregulated DEPs. DEPs were mainly enriched in cell adhesion molecules by Kyoto Encyclopedia of Genes and Genomes analysis pathway analysis. The DEPs related to axon tissue were obviously downregulated and the most significant downregulated proteins were neurexin 3, neurofascin, and neuroligin 2 (NLGN2). Moreover, the protein expression of NLGN2 in the VE group was significantly higher than that in the control group by ELISA. The correlation analysis of NLGN2 in the VE group revealed that there was a weak positive correlation with CSF protein and a weak negative correlation with CSF chloride. The clinical VE may be closely related to NLGN2 and the cell adhesion molecule pathway. John Wiley and Sons Inc. 2022-05-04 /pmc/articles/PMC10528792/ /pubmed/37786892 http://dx.doi.org/10.1002/ibra.12036 Text en © 2022 The Authors. Ibrain published by Affiliated Hospital of Zunyi Medical University and Wiley‐VCH GmbH. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Wang, Qian Yan, Shan‐Shan Zhang, Jun‐Yan Du, Ruo‐Lan Xue, Lu‐Lu Li, Juan Yu, Chang‐Yin The differentially expressed proteins related to clinical viral encephalitis revealed by proteomics |
title | The differentially expressed proteins related to clinical viral encephalitis revealed by proteomics |
title_full | The differentially expressed proteins related to clinical viral encephalitis revealed by proteomics |
title_fullStr | The differentially expressed proteins related to clinical viral encephalitis revealed by proteomics |
title_full_unstemmed | The differentially expressed proteins related to clinical viral encephalitis revealed by proteomics |
title_short | The differentially expressed proteins related to clinical viral encephalitis revealed by proteomics |
title_sort | differentially expressed proteins related to clinical viral encephalitis revealed by proteomics |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10528792/ https://www.ncbi.nlm.nih.gov/pubmed/37786892 http://dx.doi.org/10.1002/ibra.12036 |
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