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High-dimensional multivariate autoregressive model estimation of human electrophysiological data using fMRI priors
Multivariate autoregressive (MVAR) model estimation enables assessment of causal interactions in brain networks. However, accurately estimating MVAR models for high-dimensional electrophysiological recordings is challenging due to the extensive data requirements. Hence, the applicability of MVAR mod...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10528866/ https://www.ncbi.nlm.nih.gov/pubmed/37385393 http://dx.doi.org/10.1016/j.neuroimage.2023.120211 |
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author | Nagle, Alliot Gerrelts, Josh P. Krause, Bryan M. Boes, Aaron D. Bruss, Joel E. Nourski, Kirill V. Banks, Matthew I. Van Veen, Barry |
author_facet | Nagle, Alliot Gerrelts, Josh P. Krause, Bryan M. Boes, Aaron D. Bruss, Joel E. Nourski, Kirill V. Banks, Matthew I. Van Veen, Barry |
author_sort | Nagle, Alliot |
collection | PubMed |
description | Multivariate autoregressive (MVAR) model estimation enables assessment of causal interactions in brain networks. However, accurately estimating MVAR models for high-dimensional electrophysiological recordings is challenging due to the extensive data requirements. Hence, the applicability of MVAR models for study of brain behavior over hundreds of recording sites has been very limited. Prior work has focused on different strategies for selecting a subset of important MVAR coefficients in the model to reduce the data requirements of conventional least-squares estimation algorithms. Here we propose incorporating prior information, such as resting state functional connectivity derived from functional magnetic resonance imaging, into MVAR model estimation using a weighted group least absolute shrinkage and selection operator (LASSO) regularization strategy. The proposed approach is shown to reduce data requirements by a factor of two relative to the recently proposed group LASSO method of Endemann et al (Neuroimage 254:119057, 2022) while resulting in models that are both more parsimonious and more accurate. The effectiveness of the method is demonstrated using simulation studies of physiologically realistic MVAR models derived from intracranial electroencephalography (iEEG) data. The robustness of the approach to deviations between the conditions under which the prior information and iEEG data is obtained is illustrated using models from data collected in different sleep stages. This approach allows accurate effective connectivity analyses over short time scales, facilitating investigations of causal interactions in the brain underlying perception and cognition during rapid transitions in behavioral state. |
format | Online Article Text |
id | pubmed-10528866 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
record_format | MEDLINE/PubMed |
spelling | pubmed-105288662023-09-27 High-dimensional multivariate autoregressive model estimation of human electrophysiological data using fMRI priors Nagle, Alliot Gerrelts, Josh P. Krause, Bryan M. Boes, Aaron D. Bruss, Joel E. Nourski, Kirill V. Banks, Matthew I. Van Veen, Barry Neuroimage Article Multivariate autoregressive (MVAR) model estimation enables assessment of causal interactions in brain networks. However, accurately estimating MVAR models for high-dimensional electrophysiological recordings is challenging due to the extensive data requirements. Hence, the applicability of MVAR models for study of brain behavior over hundreds of recording sites has been very limited. Prior work has focused on different strategies for selecting a subset of important MVAR coefficients in the model to reduce the data requirements of conventional least-squares estimation algorithms. Here we propose incorporating prior information, such as resting state functional connectivity derived from functional magnetic resonance imaging, into MVAR model estimation using a weighted group least absolute shrinkage and selection operator (LASSO) regularization strategy. The proposed approach is shown to reduce data requirements by a factor of two relative to the recently proposed group LASSO method of Endemann et al (Neuroimage 254:119057, 2022) while resulting in models that are both more parsimonious and more accurate. The effectiveness of the method is demonstrated using simulation studies of physiologically realistic MVAR models derived from intracranial electroencephalography (iEEG) data. The robustness of the approach to deviations between the conditions under which the prior information and iEEG data is obtained is illustrated using models from data collected in different sleep stages. This approach allows accurate effective connectivity analyses over short time scales, facilitating investigations of causal interactions in the brain underlying perception and cognition during rapid transitions in behavioral state. 2023-08-15 2023-06-27 /pmc/articles/PMC10528866/ /pubmed/37385393 http://dx.doi.org/10.1016/j.neuroimage.2023.120211 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) ) |
spellingShingle | Article Nagle, Alliot Gerrelts, Josh P. Krause, Bryan M. Boes, Aaron D. Bruss, Joel E. Nourski, Kirill V. Banks, Matthew I. Van Veen, Barry High-dimensional multivariate autoregressive model estimation of human electrophysiological data using fMRI priors |
title | High-dimensional multivariate autoregressive model estimation of human electrophysiological data using fMRI priors |
title_full | High-dimensional multivariate autoregressive model estimation of human electrophysiological data using fMRI priors |
title_fullStr | High-dimensional multivariate autoregressive model estimation of human electrophysiological data using fMRI priors |
title_full_unstemmed | High-dimensional multivariate autoregressive model estimation of human electrophysiological data using fMRI priors |
title_short | High-dimensional multivariate autoregressive model estimation of human electrophysiological data using fMRI priors |
title_sort | high-dimensional multivariate autoregressive model estimation of human electrophysiological data using fmri priors |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10528866/ https://www.ncbi.nlm.nih.gov/pubmed/37385393 http://dx.doi.org/10.1016/j.neuroimage.2023.120211 |
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