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Automated Diagnosis for Colon Cancer Diseases Using Stacking Transformer Models and Explainable Artificial Intelligence

Colon cancer is the third most common cancer type worldwide in 2020, almost two million cases were diagnosed. As a result, providing new, highly accurate techniques in detecting colon cancer leads to early and successful treatment of this disease. This paper aims to propose a heterogenic stacking de...

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Autores principales: Gabralla, Lubna Abdelkareim, Hussien, Ali Mohamed, AlMohimeed, Abdulaziz, Saleh, Hager, Alsekait, Deema Mohammed, El-Sappagh, Shaker, Ali, Abdelmgeid A., Refaat Hassan, Moatamad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10529133/
https://www.ncbi.nlm.nih.gov/pubmed/37761306
http://dx.doi.org/10.3390/diagnostics13182939
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author Gabralla, Lubna Abdelkareim
Hussien, Ali Mohamed
AlMohimeed, Abdulaziz
Saleh, Hager
Alsekait, Deema Mohammed
El-Sappagh, Shaker
Ali, Abdelmgeid A.
Refaat Hassan, Moatamad
author_facet Gabralla, Lubna Abdelkareim
Hussien, Ali Mohamed
AlMohimeed, Abdulaziz
Saleh, Hager
Alsekait, Deema Mohammed
El-Sappagh, Shaker
Ali, Abdelmgeid A.
Refaat Hassan, Moatamad
author_sort Gabralla, Lubna Abdelkareim
collection PubMed
description Colon cancer is the third most common cancer type worldwide in 2020, almost two million cases were diagnosed. As a result, providing new, highly accurate techniques in detecting colon cancer leads to early and successful treatment of this disease. This paper aims to propose a heterogenic stacking deep learning model to predict colon cancer. Stacking deep learning is integrated with pretrained convolutional neural network (CNN) models with a metalearner to enhance colon cancer prediction performance. The proposed model is compared with VGG16, InceptionV3, Resnet50, and DenseNet121 using different evaluation metrics. Furthermore, the proposed models are evaluated using the LC25000 and WCE binary and muticlassified colon cancer image datasets. The results show that the stacking models recorded the highest performance for the two datasets. For the LC25000 dataset, the stacked model recorded the highest performance accuracy, recall, precision, and F1 score (100). For the WCE colon image dataset, the stacked model recorded the highest performance accuracy, recall, precision, and F1 score (98). Stacking-SVM achieved the highest performed compared to existing models (VGG16, InceptionV3, Resnet50, and DenseNet121) because it combines the output of multiple single models and trains and evaluates a metalearner using the output to produce better predictive results than any single model. Black-box deep learning models are represented using explainable AI (XAI).
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spelling pubmed-105291332023-09-28 Automated Diagnosis for Colon Cancer Diseases Using Stacking Transformer Models and Explainable Artificial Intelligence Gabralla, Lubna Abdelkareim Hussien, Ali Mohamed AlMohimeed, Abdulaziz Saleh, Hager Alsekait, Deema Mohammed El-Sappagh, Shaker Ali, Abdelmgeid A. Refaat Hassan, Moatamad Diagnostics (Basel) Article Colon cancer is the third most common cancer type worldwide in 2020, almost two million cases were diagnosed. As a result, providing new, highly accurate techniques in detecting colon cancer leads to early and successful treatment of this disease. This paper aims to propose a heterogenic stacking deep learning model to predict colon cancer. Stacking deep learning is integrated with pretrained convolutional neural network (CNN) models with a metalearner to enhance colon cancer prediction performance. The proposed model is compared with VGG16, InceptionV3, Resnet50, and DenseNet121 using different evaluation metrics. Furthermore, the proposed models are evaluated using the LC25000 and WCE binary and muticlassified colon cancer image datasets. The results show that the stacking models recorded the highest performance for the two datasets. For the LC25000 dataset, the stacked model recorded the highest performance accuracy, recall, precision, and F1 score (100). For the WCE colon image dataset, the stacked model recorded the highest performance accuracy, recall, precision, and F1 score (98). Stacking-SVM achieved the highest performed compared to existing models (VGG16, InceptionV3, Resnet50, and DenseNet121) because it combines the output of multiple single models and trains and evaluates a metalearner using the output to produce better predictive results than any single model. Black-box deep learning models are represented using explainable AI (XAI). MDPI 2023-09-13 /pmc/articles/PMC10529133/ /pubmed/37761306 http://dx.doi.org/10.3390/diagnostics13182939 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Gabralla, Lubna Abdelkareim
Hussien, Ali Mohamed
AlMohimeed, Abdulaziz
Saleh, Hager
Alsekait, Deema Mohammed
El-Sappagh, Shaker
Ali, Abdelmgeid A.
Refaat Hassan, Moatamad
Automated Diagnosis for Colon Cancer Diseases Using Stacking Transformer Models and Explainable Artificial Intelligence
title Automated Diagnosis for Colon Cancer Diseases Using Stacking Transformer Models and Explainable Artificial Intelligence
title_full Automated Diagnosis for Colon Cancer Diseases Using Stacking Transformer Models and Explainable Artificial Intelligence
title_fullStr Automated Diagnosis for Colon Cancer Diseases Using Stacking Transformer Models and Explainable Artificial Intelligence
title_full_unstemmed Automated Diagnosis for Colon Cancer Diseases Using Stacking Transformer Models and Explainable Artificial Intelligence
title_short Automated Diagnosis for Colon Cancer Diseases Using Stacking Transformer Models and Explainable Artificial Intelligence
title_sort automated diagnosis for colon cancer diseases using stacking transformer models and explainable artificial intelligence
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10529133/
https://www.ncbi.nlm.nih.gov/pubmed/37761306
http://dx.doi.org/10.3390/diagnostics13182939
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