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Effects of gastrodin on the expression of brain aging‐related genes in SAM/P‐8 mice based on network pharmacology

BACKGROUND: Gastrodin can reduce neuronal damage through multiple targets and pathways, and can be useful in preventing and treating degenerative lesions of the central nervous system, but the specific mechanism has not been elucidated. METHODS: The aging‐related genes in the hippocampus and the fro...

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Autores principales: Zhao, Nan, Jiang, Rui, Cheng, Jun‐Jie, Xiao, Qiu‐Xia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10529193/
https://www.ncbi.nlm.nih.gov/pubmed/37786545
http://dx.doi.org/10.1002/ibra.12076
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author Zhao, Nan
Jiang, Rui
Cheng, Jun‐Jie
Xiao, Qiu‐Xia
author_facet Zhao, Nan
Jiang, Rui
Cheng, Jun‐Jie
Xiao, Qiu‐Xia
author_sort Zhao, Nan
collection PubMed
description BACKGROUND: Gastrodin can reduce neuronal damage through multiple targets and pathways, and can be useful in preventing and treating degenerative lesions of the central nervous system, but the specific mechanism has not been elucidated. METHODS: The aging‐related genes in the hippocampus and the frontal cortex were detected in adult and aged mice treated with gastrodin or not. In addition, we collected the target genes of gastrodin and aging from a network database, and a Venn diagram was created to obtain the intersection target genes of gastrodin and aging. Then, the String database was used to analyze the protein–protein interactions (PPIs) between aging‐related genes and the target genes of gastrodin and aging. The “drug–disease–target–pathway” network was constructed using Cytoscape 3.7.2 software, and the main mechanism and pathway of key genes were analyzed by Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO). Finally, the reliability of these key genes was further verified by molecular docking technology. RESULTS: The results showed that 6 out of 10 genes related to brain aging were differentially expressed after gastrodin intervention. Moreover, there were 11 key genes between gastrodin and differentially expressed genes related to brain aging. GO and KEGG results suggested that material metabolism and carbohydrate digestion and absorption were associated with the pathological mechanism of gastrodin antiaging. Molecular docking results also confirmed the good binding activity of gastrodin to the key genes. CONCLUSION: Gastrodin plays a potential role in antiaging by regulating substance metabolism and carbohydrate digestion and absorption.
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spelling pubmed-105291932023-10-02 Effects of gastrodin on the expression of brain aging‐related genes in SAM/P‐8 mice based on network pharmacology Zhao, Nan Jiang, Rui Cheng, Jun‐Jie Xiao, Qiu‐Xia Ibrain Original Articles BACKGROUND: Gastrodin can reduce neuronal damage through multiple targets and pathways, and can be useful in preventing and treating degenerative lesions of the central nervous system, but the specific mechanism has not been elucidated. METHODS: The aging‐related genes in the hippocampus and the frontal cortex were detected in adult and aged mice treated with gastrodin or not. In addition, we collected the target genes of gastrodin and aging from a network database, and a Venn diagram was created to obtain the intersection target genes of gastrodin and aging. Then, the String database was used to analyze the protein–protein interactions (PPIs) between aging‐related genes and the target genes of gastrodin and aging. The “drug–disease–target–pathway” network was constructed using Cytoscape 3.7.2 software, and the main mechanism and pathway of key genes were analyzed by Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO). Finally, the reliability of these key genes was further verified by molecular docking technology. RESULTS: The results showed that 6 out of 10 genes related to brain aging were differentially expressed after gastrodin intervention. Moreover, there were 11 key genes between gastrodin and differentially expressed genes related to brain aging. GO and KEGG results suggested that material metabolism and carbohydrate digestion and absorption were associated with the pathological mechanism of gastrodin antiaging. Molecular docking results also confirmed the good binding activity of gastrodin to the key genes. CONCLUSION: Gastrodin plays a potential role in antiaging by regulating substance metabolism and carbohydrate digestion and absorption. John Wiley and Sons Inc. 2022-11-06 /pmc/articles/PMC10529193/ /pubmed/37786545 http://dx.doi.org/10.1002/ibra.12076 Text en © 2022 The Authors. Ibrain published by Affiliated Hospital of Zunyi Medical University (AHZMU) and Wiley‐VCH GmbH. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Zhao, Nan
Jiang, Rui
Cheng, Jun‐Jie
Xiao, Qiu‐Xia
Effects of gastrodin on the expression of brain aging‐related genes in SAM/P‐8 mice based on network pharmacology
title Effects of gastrodin on the expression of brain aging‐related genes in SAM/P‐8 mice based on network pharmacology
title_full Effects of gastrodin on the expression of brain aging‐related genes in SAM/P‐8 mice based on network pharmacology
title_fullStr Effects of gastrodin on the expression of brain aging‐related genes in SAM/P‐8 mice based on network pharmacology
title_full_unstemmed Effects of gastrodin on the expression of brain aging‐related genes in SAM/P‐8 mice based on network pharmacology
title_short Effects of gastrodin on the expression of brain aging‐related genes in SAM/P‐8 mice based on network pharmacology
title_sort effects of gastrodin on the expression of brain aging‐related genes in sam/p‐8 mice based on network pharmacology
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10529193/
https://www.ncbi.nlm.nih.gov/pubmed/37786545
http://dx.doi.org/10.1002/ibra.12076
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