Cargando…
Machine Learning CT-Based Automatic Nodal Segmentation and PET Semi-Quantification of Intraoperative (68)Ga-PSMA-11 PET/CT Images in High-Risk Prostate Cancer: A Pilot Study
High-resolution intraoperative PET/CT specimen imaging, coupled with prostate-specific membrane antigen (PSMA) molecular targeting, holds great potential for the rapid ex vivo identification of disease localizations in high-risk prostate cancer patients undergoing surgery. However, the accurate anal...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10529304/ https://www.ncbi.nlm.nih.gov/pubmed/37761380 http://dx.doi.org/10.3390/diagnostics13183013 |
_version_ | 1785111371924373504 |
---|---|
author | Rovera, Guido Grimaldi, Serena Oderda, Marco Finessi, Monica Giannini, Valentina Passera, Roberto Gontero, Paolo Deandreis, Désirée |
author_facet | Rovera, Guido Grimaldi, Serena Oderda, Marco Finessi, Monica Giannini, Valentina Passera, Roberto Gontero, Paolo Deandreis, Désirée |
author_sort | Rovera, Guido |
collection | PubMed |
description | High-resolution intraoperative PET/CT specimen imaging, coupled with prostate-specific membrane antigen (PSMA) molecular targeting, holds great potential for the rapid ex vivo identification of disease localizations in high-risk prostate cancer patients undergoing surgery. However, the accurate analysis of radiotracer uptake would require time-consuming manual volumetric segmentation of 3D images. The aim of this study was to test the feasibility of using machine learning to perform automatic nodal segmentation of intraoperative (68)Ga-PSMA-11 PET/CT specimen images. Six (n = 6) lymph-nodal specimens were imaged in the operating room after an e.v. injection of 2.1 MBq/kg of (68)Ga-PSMA-11. A machine learning-based approach for automatic lymph-nodal segmentation was developed using only open-source Python libraries (Scikit-learn, SciPy, Scikit-image). The implementation of a k-means clustering algorithm (n = 3 clusters) allowed to identify lymph-nodal structures by leveraging differences in tissue density. Refinement of the segmentation masks was performed using morphological operations and 2D/3D-features filtering. Compared to manual segmentation (ITK-SNAP v4.0.1), the automatic segmentation model showed promising results in terms of weighted average precision (97–99%), recall (68–81%), Dice coefficient (80–88%) and Jaccard index (67–79%). Finally, the ML-based segmentation masks allowed to automatically compute semi-quantitative PET metrics (i.e., SUVmax), thus holding promise for facilitating the semi-quantitative analysis of PET/CT images in the operating room. |
format | Online Article Text |
id | pubmed-10529304 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-105293042023-09-28 Machine Learning CT-Based Automatic Nodal Segmentation and PET Semi-Quantification of Intraoperative (68)Ga-PSMA-11 PET/CT Images in High-Risk Prostate Cancer: A Pilot Study Rovera, Guido Grimaldi, Serena Oderda, Marco Finessi, Monica Giannini, Valentina Passera, Roberto Gontero, Paolo Deandreis, Désirée Diagnostics (Basel) Article High-resolution intraoperative PET/CT specimen imaging, coupled with prostate-specific membrane antigen (PSMA) molecular targeting, holds great potential for the rapid ex vivo identification of disease localizations in high-risk prostate cancer patients undergoing surgery. However, the accurate analysis of radiotracer uptake would require time-consuming manual volumetric segmentation of 3D images. The aim of this study was to test the feasibility of using machine learning to perform automatic nodal segmentation of intraoperative (68)Ga-PSMA-11 PET/CT specimen images. Six (n = 6) lymph-nodal specimens were imaged in the operating room after an e.v. injection of 2.1 MBq/kg of (68)Ga-PSMA-11. A machine learning-based approach for automatic lymph-nodal segmentation was developed using only open-source Python libraries (Scikit-learn, SciPy, Scikit-image). The implementation of a k-means clustering algorithm (n = 3 clusters) allowed to identify lymph-nodal structures by leveraging differences in tissue density. Refinement of the segmentation masks was performed using morphological operations and 2D/3D-features filtering. Compared to manual segmentation (ITK-SNAP v4.0.1), the automatic segmentation model showed promising results in terms of weighted average precision (97–99%), recall (68–81%), Dice coefficient (80–88%) and Jaccard index (67–79%). Finally, the ML-based segmentation masks allowed to automatically compute semi-quantitative PET metrics (i.e., SUVmax), thus holding promise for facilitating the semi-quantitative analysis of PET/CT images in the operating room. MDPI 2023-09-21 /pmc/articles/PMC10529304/ /pubmed/37761380 http://dx.doi.org/10.3390/diagnostics13183013 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Rovera, Guido Grimaldi, Serena Oderda, Marco Finessi, Monica Giannini, Valentina Passera, Roberto Gontero, Paolo Deandreis, Désirée Machine Learning CT-Based Automatic Nodal Segmentation and PET Semi-Quantification of Intraoperative (68)Ga-PSMA-11 PET/CT Images in High-Risk Prostate Cancer: A Pilot Study |
title | Machine Learning CT-Based Automatic Nodal Segmentation and PET Semi-Quantification of Intraoperative (68)Ga-PSMA-11 PET/CT Images in High-Risk Prostate Cancer: A Pilot Study |
title_full | Machine Learning CT-Based Automatic Nodal Segmentation and PET Semi-Quantification of Intraoperative (68)Ga-PSMA-11 PET/CT Images in High-Risk Prostate Cancer: A Pilot Study |
title_fullStr | Machine Learning CT-Based Automatic Nodal Segmentation and PET Semi-Quantification of Intraoperative (68)Ga-PSMA-11 PET/CT Images in High-Risk Prostate Cancer: A Pilot Study |
title_full_unstemmed | Machine Learning CT-Based Automatic Nodal Segmentation and PET Semi-Quantification of Intraoperative (68)Ga-PSMA-11 PET/CT Images in High-Risk Prostate Cancer: A Pilot Study |
title_short | Machine Learning CT-Based Automatic Nodal Segmentation and PET Semi-Quantification of Intraoperative (68)Ga-PSMA-11 PET/CT Images in High-Risk Prostate Cancer: A Pilot Study |
title_sort | machine learning ct-based automatic nodal segmentation and pet semi-quantification of intraoperative (68)ga-psma-11 pet/ct images in high-risk prostate cancer: a pilot study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10529304/ https://www.ncbi.nlm.nih.gov/pubmed/37761380 http://dx.doi.org/10.3390/diagnostics13183013 |
work_keys_str_mv | AT roveraguido machinelearningctbasedautomaticnodalsegmentationandpetsemiquantificationofintraoperative68gapsma11petctimagesinhighriskprostatecancerapilotstudy AT grimaldiserena machinelearningctbasedautomaticnodalsegmentationandpetsemiquantificationofintraoperative68gapsma11petctimagesinhighriskprostatecancerapilotstudy AT oderdamarco machinelearningctbasedautomaticnodalsegmentationandpetsemiquantificationofintraoperative68gapsma11petctimagesinhighriskprostatecancerapilotstudy AT finessimonica machinelearningctbasedautomaticnodalsegmentationandpetsemiquantificationofintraoperative68gapsma11petctimagesinhighriskprostatecancerapilotstudy AT gianninivalentina machinelearningctbasedautomaticnodalsegmentationandpetsemiquantificationofintraoperative68gapsma11petctimagesinhighriskprostatecancerapilotstudy AT passeraroberto machinelearningctbasedautomaticnodalsegmentationandpetsemiquantificationofintraoperative68gapsma11petctimagesinhighriskprostatecancerapilotstudy AT gonteropaolo machinelearningctbasedautomaticnodalsegmentationandpetsemiquantificationofintraoperative68gapsma11petctimagesinhighriskprostatecancerapilotstudy AT deandreisdesiree machinelearningctbasedautomaticnodalsegmentationandpetsemiquantificationofintraoperative68gapsma11petctimagesinhighriskprostatecancerapilotstudy |